Lineage for d3ksmb_ (3ksm B:)

  1. Root: SCOPe 2.05
  2. 1815291Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 1878506Fold c.93: Periplasmic binding protein-like I [53821] (1 superfamily)
    consists of two similar intertwined domain with 3 layers (a/b/a) each: duplication
    parallel beta-sheet of 6 strands, order 213456
  4. 1878507Superfamily c.93.1: Periplasmic binding protein-like I [53822] (2 families) (S)
    Similar in architecture to the superfamily II but partly differs in topology
  5. 1878777Family c.93.1.0: automated matches [191439] (1 protein)
    not a true family
  6. 1878778Protein automated matches [190646] (60 species)
    not a true protein
  7. 1878913Species Hahella chejuensis [TaxId:349521] [196493] (1 PDB entry)
  8. 1878915Domain d3ksmb_: 3ksm B: [196494]
    automated match to d2ioya_
    complexed with bdr

Details for d3ksmb_

PDB Entry: 3ksm (more details), 1.9 Å

PDB Description: crystal structure of abc-type sugar transport system, periplasmic component from hahella chejuensis
PDB Compounds: (B:) ABC-type sugar transport system, periplasmic component

SCOPe Domain Sequences for d3ksmb_:

Sequence, based on SEQRES records: (download)

>d3ksmb_ c.93.1.0 (B:) automated matches {Hahella chejuensis [TaxId: 349521]}
klllvlkgdsnaywrqvylgaqkaadeagvtllhrstkddgdiagqiqilsyhlsqappd
alilapnsaedltpsvaqyrarnipvlvvdsdlagdahqglvatdnyaagqlaarallat
ldlskerniallrlragnastdqreqgfldvlrkhdkiriiaapyagddrgaarsemlrl
lketptidglftpnesttigalvairqsgmskqfgfigfdqteeleaamyageisnlvvq
npeymgylavqraldlvrgkpipaftdtgvrllqe

Sequence, based on observed residues (ATOM records): (download)

>d3ksmb_ c.93.1.0 (B:) automated matches {Hahella chejuensis [TaxId: 349521]}
klllvlkgdsnaywrqvylgaqkaadeagvtllhrstkddgdiagqiqilsyhlsqapda
lilapnsaedltpsvaqyrarnipvlvvdsdlagdahqglvatdnyaagqlaarallatl
dlskerniallrlragnastdqreqgfldvlrkhdkiriiaapyagddrgaarsemlrll
ketptidglftpnesttigalvairqsgmskqfgfigfdqteeleaamyageisnlvvqn
peymgylavqraldlvrgkpipaftdtgvrllqe

SCOPe Domain Coordinates for d3ksmb_:

Click to download the PDB-style file with coordinates for d3ksmb_.
(The format of our PDB-style files is described here.)

Timeline for d3ksmb_: