Lineage for d1x8ma_ (1x8m A:)

  1. Root: SCOPe 2.05
  2. 1755445Class b: All beta proteins [48724] (176 folds)
  3. 1807020Fold b.82: Double-stranded beta-helix [51181] (7 superfamilies)
    one turn of helix is made by two pairs of antiparallel strands linked with short turns
    has appearance of a sandwich of distinct architecture and jelly-roll topology
  4. 1807021Superfamily b.82.1: RmlC-like cupins [51182] (25 families) (S)
  5. 1807421Family b.82.1.13: KduI-like [110318] (1 protein)
    Pfam PF04962: duplication: consists of two germin-like domains
  6. 1807422Protein 5-keto-4-deoxyuronate isomerase KduI [110319] (2 species)
  7. 1807430Species Escherichia coli [TaxId:562] [110320] (2 PDB entries)
    Uniprot Q46938 1-266
  8. 1807433Domain d1x8ma_: 1x8m A: [109516]

Details for d1x8ma_

PDB Entry: 1x8m (more details), 2.6 Å

PDB Description: x-ray structure of pectin degrading enzyme 5-keto 4-deoxyuronate isomerase from escherichia coli
PDB Compounds: (A:) 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase

SCOPe Domain Sequences for d1x8ma_:

Sequence, based on SEQRES records: (download)

>d1x8ma_ b.82.1.13 (A:) 5-keto-4-deoxyuronate isomerase KduI {Escherichia coli [TaxId: 562]}
sldvrqsihsahaktldtqglrneflvekvfvadeytmvyshidriivggimpitktvsv
ggevgkqlgvsyflerrelgviniggagtitvdgqcyeighrdalyvgkgakevvfasid
tgtpakfyyncapahttyptkkvtpdevspvtlgdnltsnrrtinkyfvpdvletcqlsm
gltelapgnlwntmpchtherrmevyfyfnmdddacvfhmmgqpqetrhivmhneqavis
pswsihsgvgtkaytfiwgmvgenqvf

Sequence, based on observed residues (ATOM records): (download)

>d1x8ma_ b.82.1.13 (A:) 5-keto-4-deoxyuronate isomerase KduI {Escherichia coli [TaxId: 562]}
sldvrqsihsahaktldtqglrneflvekvfvadeytmvyshidriivggimpitktvsv
ggevgkqlgvsyflerrelgviniggagtitvdgqcyeighrdalyvgkgakevvfasid
tgtpakfyyncapahttyptkkvtpdevspvtlgdnltsnrrtinkyfvpdvletcqlsm
gltelapgnlwntrmevyfyfnmdddacvfhmmgqpqetrhivmhneqavispswsihsg
vgtkaytfiwgmvgenqvf

SCOPe Domain Coordinates for d1x8ma_:

Click to download the PDB-style file with coordinates for d1x8ma_.
(The format of our PDB-style files is described here.)

Timeline for d1x8ma_: