Lineage for d1wd8a3 (1wd8 A:294-663)

  1. Root: SCOP 1.75
  2. 849709Class d: Alpha and beta proteins (a+b) [53931] (376 folds)
  3. 872041Fold d.126: Pentein, beta/alpha-propeller [55908] (1 superfamily)
    duplication: composed of 5 alpha-beta(2)-alpha-beta units arranged around pseudo fivefold axis
  4. 872042Superfamily d.126.1: Pentein [55909] (7 families) (S)
  5. 872100Family d.126.1.5: Peptidylarginine deiminase Pad4, catalytic C-terminal domain [111152] (1 protein)
    # functionally related to the amidinotransferase, similar active sites
  6. 872101Protein Peptidylarginine deiminase Pad4, catalytic C-terminal domain [111153] (1 species)
  7. 872102Species Human (Homo sapiens) [TaxId:9606] [111154] (7 PDB entries)
    Uniprot Q9UM07
  8. 872109Domain d1wd8a3: 1wd8 A:294-663 [109239]
    Other proteins in same PDB: d1wd8a1, d1wd8a2

Details for d1wd8a3

PDB Entry: 1wd8 (more details), 2.8 Å

PDB Description: Calcium free form of human peptidylarginine deiminase type4 (PAD4)
PDB Compounds: (A:) Protein-arginine deiminase type IV

SCOP Domain Sequences for d1wd8a3:

Sequence, based on SEQRES records: (download)

>d1wd8a3 d.126.1.5 (A:294-663) Peptidylarginine deiminase Pad4, catalytic C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
apwimtpntqppqevyacsifenedflksvttlamkakcklticpeeenmddqwmqdeme
igyiqaphktlpvvfdsprnrglkefpikrvmgpdfgyvtrgpqtggisgldsfgnlevs
ppvtvrgkeyplgrilfgdscypsndsrqmhqalqdflsaqqvqapvklysdwlsvghvd
eflsfvpapdrkgfrlllasprscyklfqeqqneghgeallfegikkkkqqkiknilsnk
tlrehnsfvercidwnrellkrelglaesdiidipqlfklkefskaeaffpnmvnmlvlg
khlgipkpfgpvingrccleekvcslleplglqctfindfftyhirhgevhcgtnvrrkp
fsfkwwnmvp

Sequence, based on observed residues (ATOM records): (download)

>d1wd8a3 d.126.1.5 (A:294-663) Peptidylarginine deiminase Pad4, catalytic C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
apwimtpntqppqevyacslksvttlamkakcklticqdemeigyiqaphktlpvvfdsd
fgyvtrggldsfgnlevsppvtvrgkeyplgrilfgdscypsndsrqmhqalqdflsaqq
vqapvklysdwlsvghvdeflsfvpapdrkgfrlllasprscyklfqeqqneghgeallf
kqqkiknilsnktlrehnsfvercidwnrellkrelglaesdiidipqlfklkefskaea
ffpnmvnmlvlgkhlgipkpfgpvingrccleekvcslleplglqctfindcgtnvrrkp
fsfkwwnmvp

SCOP Domain Coordinates for d1wd8a3:

Click to download the PDB-style file with coordinates for d1wd8a3.
(The format of our PDB-style files is described here.)

Timeline for d1wd8a3: