Lineage for d1w2bd_ (1w2b D:)

  1. Root: SCOPe 2.04
  2. 1710350Class i: Low resolution protein structures [58117] (25 folds)
  3. 1710351Fold i.1: Ribosome and ribosomal fragments [58118] (1 superfamily)
  4. 1710352Superfamily i.1.1: Ribosome and ribosomal fragments [58119] (3 families) (S)
  5. 1711204Family i.1.1.2: Large subunit [58124] (1 protein)
  6. 1711205Protein 50S subunit [58125] (6 species)
  7. 1711354Species Haloarcula marismortui [TaxId:2238] [58126] (20 PDB entries)
  8. 1711613Domain d1w2bd_: 1w2b D: [109097]
    50S subunit in complex with the trigger factor
    protein/RNA complex; complexed with cd, cl, k, mg, na

Details for d1w2bd_

PDB Entry: 1w2b (more details), 3.5 Å

PDB Description: trigger factor ribosome binding domain in complex with 50s
PDB Compounds: (D:) 50s ribosomal protein l5p hmal5, hl13, ribosomal protein l5

SCOPe Domain Sequences for d1w2bd_:

Sequence, based on SEQRES records: (download)

>d1w2bd_ i.1.1.2 (D:) 50S subunit {Haloarcula marismortui [TaxId: 2238]}
fhemrepriekvvvhmgighggrdlanaedilgeitgqmpvrtkakrtvgefdiregdpi
gakvtlrdemaeeflqtalplaelatsqfddtgnfsfgveehtefpsqeydpsigiygld
vtvnlvrpgyrvakrdkasrsiptkhrlnpadavafiestydvevs

Sequence, based on observed residues (ATOM records): (download)

>d1w2bd_ i.1.1.2 (D:) 50S subunit {Haloarcula marismortui [TaxId: 2238]}
fhemrepriekvvvhmgighanaedilgeitgqmpvrtkakrtvgefdiregdpigakvt
lrdemaeeflqtalplaelatsqfddtgnfsfgldvtvnlvrpgyrvakrdkasrsiptk
hrlnpadavafiestydvevs

SCOPe Domain Coordinates for d1w2bd_:

Click to download the PDB-style file with coordinates for d1w2bd_.
(The format of our PDB-style files is described here.)

Timeline for d1w2bd_: