Lineage for d1q94a2 (1q94 A:1-181)

  1. Root: SCOP 1.75
  2. 849709Class d: Alpha and beta proteins (a+b) [53931] (376 folds)
  3. 856282Fold d.19: MHC antigen-recognition domain [54451] (1 superfamily)
    dimeric
  4. 856283Superfamily d.19.1: MHC antigen-recognition domain [54452] (1 family) (S)
  5. 856284Family d.19.1.1: MHC antigen-recognition domain [54453] (12 proteins)
  6. 856331Protein Class I MHC, alpha-1 and alpha-2 domains [54468] (27 species)
  7. 856335Species Human (Homo sapiens), HLA-A11 [TaxId:9606] [110840] (4 PDB entries)
    Uniprot P13746 25-299 # 1A11_HUMAN HLA class I histocompatibility antigen, A-11 alpha chain precursor
  8. 856340Domain d1q94a2: 1q94 A:1-181 [104560]
    Other proteins in same PDB: d1q94a1, d1q94b_, d1q94d1, d1q94e_

Details for d1q94a2

PDB Entry: 1q94 (more details), 2.4 Å

PDB Description: structures of hla-a*1101 in complex with immunodominant nonamer and decamer hiv-1 epitopes clearly reveal the presence of a middle anchor residue
PDB Compounds: (A:) HLA class I histocompatibility antigen, A-11 alpha chain

SCOP Domain Sequences for d1q94a2:

Sequence; same for both SEQRES and ATOM records: (download)

>d1q94a2 d.19.1.1 (A:1-181) Class I MHC, alpha-1 and alpha-2 domains {Human (Homo sapiens), HLA-A11 [TaxId: 9606]}
gshsmryfytsvsrpgrgeprfiavgyvddtqfvrfdsdaasqrmeprapwieqegpeyw
dqetrnvkaqsqtdrvdlgtlrgyynqsedgshtiqimygcdvgpdgrflrgyrqdaydg
kdyialnedlrswtaadmaaqitkrkweaahaaeqqraylegrcvewlrrylengketlq
r

SCOP Domain Coordinates for d1q94a2:

Click to download the PDB-style file with coordinates for d1q94a2.
(The format of our PDB-style files is described here.)

Timeline for d1q94a2:

856340
d1q94a2 in context of chain
View in 3D
Domains from same chain:
(mouse over for more information)
d1q94a1