Lineage for d1nqda_ (1nqd A:)

  1. Root: SCOPe 2.06
  2. 2021373Class b: All beta proteins [48724] (177 folds)
  3. 2046279Fold b.18: Galactose-binding domain-like [49784] (1 superfamily)
    sandwich; 9 strands in 2 sheets; jelly-roll
  4. 2046280Superfamily b.18.1: Galactose-binding domain-like [49785] (35 families) (S)
  5. 2047088Family b.18.1.36: Collagen-binding domain [267607] (1 protein)
    PubMed 17977833 describes likely homology between (d2quoa_), (d1w99a3), and (d1nqdb_)
  6. 2047089Protein Class 1 collagenase [267633] (1 species)
  7. 2047090Species Clostridium histolyticum [TaxId:1498] [267693] (5 PDB entries)
  8. 2047097Domain d1nqda_: 1nqd A: [86025]
    Other proteins in same PDB: d1nqdb2
    complexed with ca

Details for d1nqda_

PDB Entry: 1nqd (more details), 1.65 Å

PDB Description: crystal structure of clostridium histolyticum colg collagenase collagen-binding domain 3b at 1.65 angstrom resolution in presence of calcium
PDB Compounds: (A:) class 1 collagenase

SCOPe Domain Sequences for d1nqda_:

Sequence, based on SEQRES records: (download)

>d1nqda_ b.18.1.36 (A:) Class 1 collagenase {Clostridium histolyticum [TaxId: 1498]}
eklkekenndssdkatvipnfnttmqgsllgddsrdyysfevkeegevnieldkkdefgv
twtlhpesnindritygqvdgnkvsnkvklrpgkyyllvykysgsgnyelrvnk

Sequence, based on observed residues (ATOM records): (download)

>d1nqda_ b.18.1.36 (A:) Class 1 collagenase {Clostridium histolyticum [TaxId: 1498]}
eklkekenndssdkatvipnfnttmqgsllgddsrdyysfevkeegevnieldkkdefgv
twtlhpesdritygqvdgnkvsnkvklrpgkyyllvykysgsgnyelrvnk

SCOPe Domain Coordinates for d1nqda_:

Click to download the PDB-style file with coordinates for d1nqda_.
(The format of our PDB-style files is described here.)

Timeline for d1nqda_: