Lineage for d1nava_ (1nav A:)

  1. Root: SCOPe 2.05
  2. 1715731Class a: All alpha proteins [46456] (286 folds)
  3. 1747085Fold a.123: Nuclear receptor ligand-binding domain [48507] (1 superfamily)
    multihelical; 3 layers or orthogonally packed helices
  4. 1747086Superfamily a.123.1: Nuclear receptor ligand-binding domain [48508] (2 families) (S)
  5. 1747087Family a.123.1.1: Nuclear receptor ligand-binding domain [48509] (34 proteins)
  6. 1747898Protein Thyroid hormone receptor alpha1 (TR-alpha1) [48532] (1 species)
  7. 1747899Species Human (Homo sapiens) [TaxId:9606] [88962] (5 PDB entries)
  8. 1747904Domain d1nava_: 1nav A: [85500]
    complexed with ih5, so4

Details for d1nava_

PDB Entry: 1nav (more details), 2.5 Å

PDB Description: Thyroid Receptor Alpha in complex with an agonist selective for Thyroid Receptor Beta1
PDB Compounds: (A:) hormone receptor alpha 1, THRA1

SCOPe Domain Sequences for d1nava_:

Sequence, based on SEQRES records: (download)

>d1nava_ a.123.1.1 (A:) Thyroid hormone receptor alpha1 (TR-alpha1) {Human (Homo sapiens) [TaxId: 9606]}
hmeemirslqqrpeptpeewdlihiateahrstnaqgshwkqrrkflpddigqspivsmp
dgdkvdleafseftkiitpaitrvvdfakklpmfselpcedqiillkgccmeimslraav
rydpesdtltlsgemavkreqlkngglgvvsdaifelgkslsafnlddtevallqavllm
stdrsgllcvdkieksqeayllafehyvnhrkhniphfwpkllmkvtdlrmigachasrf
lhmkvecptelfpplflevfedq

Sequence, based on observed residues (ATOM records): (download)

>d1nava_ a.123.1.1 (A:) Thyroid hormone receptor alpha1 (TR-alpha1) {Human (Homo sapiens) [TaxId: 9606]}
hmeemirslqqrpeptpeewdlihiateahrstnakqrrkflpddigqspdgdkvdleaf
seftkiitpaitrvvdfakklpmfselpcedqiillkgccmeimslraavrydpesdtlt
lsgemavkreqlkngglgvvsdaifelgkslsafnlddtevallqavllmstdrsgllcv
dkieksqeayllafehyvnhrkhniphfwpkllmkvtdlrmigachasrflhmkvecpte
lfpplflevfedq

SCOPe Domain Coordinates for d1nava_:

Click to download the PDB-style file with coordinates for d1nava_.
(The format of our PDB-style files is described here.)

Timeline for d1nava_: