Lineage for d1kgqa_ (1kgq A:)

  1. Root: SCOPe 2.08
  2. 2739516Class b: All beta proteins [48724] (180 folds)
  3. 2813832Fold b.81: Single-stranded left-handed beta-helix [51160] (4 superfamilies)
    superhelix turns are made of parallel beta-strands and (short) turns
  4. 2813833Superfamily b.81.1: Trimeric LpxA-like enzymes [51161] (9 families) (S)
    superhelical turns are made of three short strands; duplication: the sequence hexapeptide repeats correspond to individual strands
  5. 2813856Family b.81.1.2: Tetrahydrodipicolinate-N-succinlytransferase, THDP-succinlytransferase, DapD [51165] (2 proteins)
    contains extra N-terminal 3-helical domain
    this is a repeat family; one repeat unit is 6amy A:120-137 found in domain
  6. 2813857Protein Tetrahydrodipicolinate-N-succinlytransferase, THDP-succinlytransferase, DapD [51166] (3 species)
  7. 2813865Species Mycobacterium bovis [TaxId:1765] [51167] (5 PDB entries)
  8. 2813872Domain d1kgqa_: 1kgq A: [72447]
    complexed with npi, sco

Details for d1kgqa_

PDB Entry: 1kgq (more details), 2 Å

PDB Description: crystal structure of tetrahydrodipicolinate n-succinyltransferase in complex with l-2-aminopimelate and succinamide-coa
PDB Compounds: (A:) 2,3,4,5-tetrahydropyridine-2-carboxylate n-succinyltransferase

SCOPe Domain Sequences for d1kgqa_:

Sequence; same for both SEQRES and ATOM records: (download)

>d1kgqa_ b.81.1.2 (A:) Tetrahydrodipicolinate-N-succinlytransferase, THDP-succinlytransferase, DapD {Mycobacterium bovis [TaxId: 1765]}
mqqlqnviesaferraditpanvdtvtreavnqviglldsgalrvaekidgqwvthqwlk
kavllsfrindnkvmdgaetryydkvpmkfadydearfqkegfrvvppatvrqgafiarn
tvlmpsyvnigayvdegtmvdtwatvgscaqigknvhlsggvgiggvleplqanptiied
ncfigarsevvegviveegsvismgvylgqstriydretgeihygrvpagsvvvsgnlps
kdgsyslycavivkkvdaktrgkvginellrtid

SCOPe Domain Coordinates for d1kgqa_:

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(The format of our PDB-style files is described here.)

Timeline for d1kgqa_: