Lineage for d1b04a_ (1b04 A:)
- Root: SCOPe 2.01
Class d: Alpha and beta proteins (a+b) [53931] (376 folds) 
Fold d.142: ATP-grasp [56058] (2 superfamilies)
Consists of two subdomains with different alpha+beta folds
shares functional and structural similarities with the PIPK and protein kinase superfamilies
Superfamily d.142.2: DNA ligase/mRNA capping enzyme, catalytic domain [56091] (4 families) 
has a circularly permuted topology
Family d.142.2.2: Adenylation domain of NAD+-dependent DNA ligase [56096] (1 protein) Protein Adenylation domain of NAD+-dependent DNA ligase [56097] (4 species)
contains additional, N-terminal all-alpha subdomain
Species Bacillus stearothermophilus [TaxId:1422] [56098] (1 PDB entry) 
Domain d1b04a_: 1b04 A: [41579]
Details for d1b04a_
PDB Entry: 1b04 (more details), 2.8 Å
PDB Description: structure of the adenylation domain of an nad+ dependent ligase
PDB Compounds: (A:) protein (DNA ligase)SCOPe Domain Sequences for d1b04a_:
Sequence, based on SEQRES records: (download)
>d1b04a_ d.142.2.2 (A:) Adenylation domain of NAD+-dependent DNA ligase {Bacillus stearothermophilus [TaxId: 1422]}
drqqaerraaelrellnrygyeyyvldrpsvpdaeydrlmqeliaieeqypelktsdspt
qriggppleafrkvahrvpmmslanafgegdlrdfdrrvrqevgeaayvcelaidglavs
vryedgyfvqgatrgdgttgeditenlktirslplrlkepvsleargeafmpkasflrln
eerkargeelfanprnaaagslrqldpkvaasrqldlfvygladaealgiashsealdyl
qalgfkvnperrrcanideviafvsewhdkrpqlpyeidgivikvdsfaqqralgataks
prwaiaykfpae
Sequence, based on observed residues (ATOM records): (download)
>d1b04a_ d.142.2.2 (A:) Adenylation domain of NAD+-dependent DNA ligase {Bacillus stearothermophilus [TaxId: 1422]}
drqqaerraaelrellnrygyeyyvldrpsvpdaeydrlmqeliaieeqypelktsdspt
qriggppleafrkvahrvpmmslanafgegdlrdfdrrvrqevgeaayvcelaidglavs
vryedgyfvqgatrgdgttgeditenlktirslplrlkepvsleargeafmpkasflrln
eerkarelfanprnaaagslrqldpkvaasrqldlfvygladaealgiashsealdylqa
lgfkvnperrrcanideviafvsewhdkrpqlpyeidgivikvdsfaqqralgatakspr
waiaykfpae
SCOPe Domain Coordinates for d1b04a_:
Click to download the PDB-style file with coordinates for d1b04a_.
(The format of our PDB-style files is described here.)
(The format of our PDB-style files is described here.)
Timeline for d1b04a_:
- d1b04a_ first appeared (with stable ids) in SCOP 1.55
- d1b04a_ appears in SCOP 1.75
- d1b04a_ appears in SCOPe 2.02
- d1b04a_ appears in the current release, SCOPe 2.08
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