SCOPe 2.08: Family c.1.11.0: automated matches

Lineage for Family c.1.11.0: automated matches

Root: SCOPe 2.08
Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

Fold c.1: TIM beta/alpha-barrel [51350] (34 superfamilies)
contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
the first seven superfamilies have similar phosphate-binding sites

Superfamily c.1.11: Enolase C-terminal domain-like [51604] (3 families)

(S)

binds metal ion (magnesium or manganese) in conserved site inside barrel
N-terminal alpha+beta domain is common to this superfamily

Family c.1.11.0: automated matches [227196] (1 protein)
not a true family

Protein:

automated matches [226923] (79 species)
not a true protein
1. Species Actinobacillus succinogenes [TaxId:339671] [232973] (3 PDB entries)
2. Species Agrobacterium tumefaciens [TaxId:176299] [256273] (2 PDB entries)
3. Species Amycolatopsis sp. [TaxId:37632] [226810] (1 PDB entry)
4. Species Anaerostipes caccae [TaxId:411490] [226256] (1 PDB entry)
5. Species Aspergillus oryzae [TaxId:510516] [225271] (1 PDB entry)
6. Species Azorhizobium caulinodans [TaxId:438753] [225921] (1 PDB entry)
7. Species Azospirillum sp. [TaxId:137722] [226671] (1 PDB entry)
8. Species Bacillus cereus [TaxId:226900] [225290] (3 PDB entries)
9. Species Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] [226794] (5 PDB entries)
10. Species Bordetella bronchiseptica [TaxId:518] [256003] (4 PDB entries)
11. Species Bradyrhizobium sp. [TaxId:114615] [233701] (2 PDB entries)
12. Species Burkholderia sp. [TaxId:269483] [255988] (1 PDB entry)
13. Species Campylobacter jejuni [TaxId:197] [226083] (1 PDB entry)
14. Species Caulobacter crescentus [TaxId:155892] [267903] (1 PDB entry)
15. Species Caulobacter crescentus [TaxId:190650] [267942] (1 PDB entry)
16. Species Caulobacter sp. [TaxId:366602] [267934] (1 PDB entry)
17. Species Cellvibrio japonicus [TaxId:498211] [267899] (2 PDB entries)
18. Species Chlamydia trachomatis [TaxId:471473] [366251] (1 PDB entry)
19. Species Chloroflexus aurantiacus [TaxId:324602] [274584] (3 PDB entries)
20. Species Chromohalobacter salexigens [TaxId:158080] [267865] (6 PDB entries)
21. Species Chromohalobacter salexigens [TaxId:290398] [232967] (8 PDB entries)
22. Species Clostridium tetanomorphum [TaxId:1553] [226805] (2 PDB entries)
23. Species Corynebacterium glutamicum [TaxId:1718] [225728] (1 PDB entry)
24. Species Coxiella burnetii [TaxId:777] [226219] (1 PDB entry)
25. Species Cytophaga hutchinsonii [TaxId:269798] [256030] (2 PDB entries)
26. Species Entamoeba (Entamoeba histolytica) [TaxId:5759] [226173] (1 PDB entry)
27. Species Enterobacter sp. [TaxId:399742] [267888] (1 PDB entry)
28. Species Enterococcus gallinarum [TaxId:565653] [267946] (1 PDB entry)
29. Species Escherichia coli K-12 [TaxId:83333] [256279] (1 PDB entry)
30. Species Escherichia coli [TaxId:511145] [256303] (1 PDB entry)
31. Species Francisella philomiragia [TaxId:484022] [226098] (5 PDB entries)
32. Species Fusarium graminearum (Gibberella zeae) [TaxId:5518] [233836] (1 PDB entry)
33. Species Herpetosiphon aurantiacus [TaxId:316274] [225738] (1 PDB entry)
34. Species Jannaschia sp. [TaxId:290400] [232556] (1 PDB entry)
35. Species Klebsiella pneumoniae [TaxId:272620] [225572] (1 PDB entry)
36. Species Labrenzia aggregata [TaxId:384765] [228394] (1 PDB entry)
37. Species Legionella pneumophila [TaxId:272624] [362803] (1 PDB entry)
38. Species Legionella pneumophila [TaxId:446] [362417] (1 PDB entry)
39. Species Marine actinobacterium [TaxId:312284] [255974] (3 PDB entries)
40. Species Mesorhizobium loti [TaxId:266835] [225267] (1 PDB entry)
41. Species Methylococcus capsulatus [TaxId:414] [226117] (2 PDB entries)
42. Species Mycobacterium smegmatis [TaxId:246196] [225618] (5 PDB entries)
43. Species Mycobacterium tuberculosis [TaxId:1773] [420111] (2 PDB entries)
44. Species Mycobacterium tuberculosis [TaxId:83332] [395131] (3 PDB entries)
45. Species Novosphingobium aromaticivorans [TaxId:279238] [267959] (3 PDB entries)
46. Species Novosphingobium aromaticivorans [TaxId:48935] [267802] (3 PDB entries)
47. Species Oceanobacillus iheyensis [TaxId:182710] [255531] (3 PDB entries)
48. Species Oceanobacillus iheyensis [TaxId:221109] [255838] (3 PDB entries)
49. Species Paracoccus denitrificans [TaxId:318586] [234379] (3 PDB entries)
50. Species Pelagibaca bermudensis [TaxId:314265] [234604] (1 PDB entry)
51. Species Polaromonas sp. [TaxId:296591] [231856] (1 PDB entry)
52. Species Pseudomonas fluorescens [TaxId:205922] [226580] (1 PDB entry)
53. Species Pseudomonas fluorescens [TaxId:220664] [225447] (3 PDB entries)
54. Species Pseudomonas mendocina [TaxId:399739] [234660] (1 PDB entry)
55. Species Ralstonia pickettii [TaxId:402626] [233179] (1 PDB entry)
56. Species Rhodobacter sphaeroides [TaxId:1063] [255226] (1 PDB entry)
57. Species Rhodococcus opacus [TaxId:37919] [257921] (1 PDB entry)
58. Species Roseiflexus sp. [TaxId:357808] [226247] (1 PDB entry)
59. Species Roseovarius nubinhibens [TaxId:89187] [225251] (5 PDB entries)
60. Species Roseovarius sp. [TaxId:314265] [231165] (1 PDB entry)
61. Species Ruegeria pomeroyi [TaxId:89184] [255879] (1 PDB entry)
62. Species Salmonella typhimurium [TaxId:99287] [225194] (1 PDB entry)
63. Species Shewanella pealeana [TaxId:398579] [233539] (1 PDB entry)
64. Species Silicibacter pomeroyi [TaxId:89184] [225529] (1 PDB entry)
65. Species Sinorhizobium meliloti [TaxId:266834] [231148] (1 PDB entry)
66. Species Sphingomonas sp. [TaxId:314266] [267886] (1 PDB entry)
67. Species Streptococcus pyogenes [TaxId:286636] [236667] (3 PDB entries)
68. Species Streptomyces coelicolor [TaxId:100226] [231096] (3 PDB entries)
69. Species Streptomyces coelicolor [TaxId:1902] [256242] (1 PDB entry)
70. Species Synechococcus elongatus [TaxId:269084] [261952] (2 PDB entries)
71. Species Thermobispora bispora [TaxId:469371] [233843] (3 PDB entries)
72. Species Thermotoga maritima [TaxId:243274] [225440] (5 PDB entries)
73. Species Thermus thermophilus HB8 [TaxId:300852] [225416] (1 PDB entry)
74. Species Toxoplasma gondii [TaxId:508771] [225975] (1 PDB entry)
75. Species Vibrio harveyi [TaxId:673519] [267937] (3 PDB entries)
76. Species Vibrio sp. [TaxId:1116375] [339695] (3 PDB entries)
77. Species Vibrionales bacterium [TaxId:391574] [311278] (1 PDB entry)
78. Species Zobellia galactanivorans [TaxId:63186] [342332] (1 PDB entry)
79. Species Zymomonas mobilis [TaxId:542] [225233] (1 PDB entry)

More info for Family c.1.11.0: automated matches

Timeline for Family c.1.11.0: automated matches:

Family c.1.11.0: automated matches first appeared in SCOPe 2.03
Family c.1.11.0: automated matches appears in SCOPe 2.07