PDB entry 9icp
View 9icp on RCSB PDB site
Description: DNA polymerase beta (pol b) (e.c.2.7.7.7) complexed with six base pairs of DNA; soaked in the presence of pyrophosphate (1 millimolar) and mgcl2 (5 millimolar)
Class: transferase/DNA
Keywords: DNA-directed DNA polymerase, DNA replication, DNA repair, nucleotidyltransferase, complex (nucleotidyltransferase/DNA
Deposited on
1995-12-16, released
1996-11-15
The last revision prior to the SCOPe 2.08 freeze date was dated
2009-02-24, with a file datestamp of
2009-03-01.
Experiment type: XRAY
Resolution: 3.1 Å
R-factor: 0.165
AEROSPACI score: 0.2
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: protein (DNA polymerase beta (e.c.2.7.7.7))
Species: Homo sapiens [TaxId:9606]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d9icpa1, d9icpa3, d9icpa4 - Chain 'P':
Compound: DNA (5'-d(*cp*ap*gp*ap*tp*g)-3')
- Chain 'T':
Compound: DNA (5'-d(*cp*ap*tp*cp*tp*gp*t)-3')
- Heterogens: NA, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>9icpA (A:)
mskrkapqetlnggitdmltelanfeknvsqaihkynayrkaasviakyphkiksgaeak
klpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegik
tledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgs
frrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlskgetkfmgvcq
lpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirp
lgvtgvageplpvdsekdifdyiqwkyrepkdrse
Sequence, based on observed residues (ATOM records): (download)
>9icpA (A:)
etlnggitdmltelanfeknvsqaihkynayrkaasviakyphkiksgaeakklpgvgtk
iaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrkn
edklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaess
gdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlskgetkfmgvcqlpskndek
eyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvag
eplpvdsekdifdyiqwkyrepkdrse
- Chain 'P':
No sequence available.
- Chain 'T':
No sequence available.