PDB entry 6yeb

View 6yeb on RCSB PDB site
Description: E.coli's Putrescine receptor PotF in its closed apo state
Class: transport protein
Keywords: Periplasmic binding protein, E.coli, closed apo, TRANSPORT PROTEIN
Deposited on 2020-03-24, released 2021-01-20
The last revision prior to the SCOPe 2.08 freeze date was dated 2021-05-19, with a file datestamp of 2021-05-14.
Experiment type: XRAY
Resolution: 1.97 Å
R-factor: N/A
AEROSPACI score: 0.4 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Putrescine-binding periplasmic protein
    Species: Escherichia coli K-12 [TaxId:83333]
    Gene: potF, b0854, JW0838
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6yeba_
  • Chain 'B':
    Compound: Putrescine-binding periplasmic protein
    Species: Escherichia coli K-12 [TaxId:83333]
    Gene: potF, b0854, JW0838
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6yebb_
  • Heterogens: GOL, PGE, PEG, EDO, SO4, CL, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >6yebA (A:)
aeqktlhiynwsdyiapdtvanfeketgikvvydvfdsnevlegklmagstgfdlvvpsa
sflerqltagvfqpldksklpewknldpellklvakhdpdnkfampymwattgigynvdk
vkavlgenapvdswdlilkpenleklkscgvsfldapeevfatvlnylgkdpnstkaddy
tgpatdlllklrpniryfhssqyindlangdicvaigwagdvwqasnrakeakngvnvsf
sipkegamaffdvfampadaknkdeayqflnyllrpdvvahisdhvfyanankaatplvs
aevrenpgiyppadvraklftlkvqdpkidrvrtrawtkvksgklehhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >6yebA (A:)
qktlhiynwsdyiapdtvanfeketgikvvydvfdsnevlegklmagstgfdlvvpsasf
lerqltagvfqpldksklpewknldpellklvakhdpdnkfampymwattgigynvdkvk
avlgenapvdswdlilkpenleklkscgvsfldapeevfatvlnylgkdpnstkaddytg
patdlllklrpniryfhssqyindlangdicvaigwagdvwqasnrakeakngvnvsfsi
pkegamaffdvfampadaknkdeayqflnyllrpdvvahisdhvfyanankaatplvsae
vrenpgiyppadvraklftlkvqdpkidrvrtrawtkvksg

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >6yebB (B:)
aeqktlhiynwsdyiapdtvanfeketgikvvydvfdsnevlegklmagstgfdlvvpsa
sflerqltagvfqpldksklpewknldpellklvakhdpdnkfampymwattgigynvdk
vkavlgenapvdswdlilkpenleklkscgvsfldapeevfatvlnylgkdpnstkaddy
tgpatdlllklrpniryfhssqyindlangdicvaigwagdvwqasnrakeakngvnvsf
sipkegamaffdvfampadaknkdeayqflnyllrpdvvahisdhvfyanankaatplvs
aevrenpgiyppadvraklftlkvqdpkidrvrtrawtkvksgklehhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >6yebB (B:)
qktlhiynwsdyiapdtvanfeketgikvvydvfdsnevlegklmagstgfdlvvpsasf
lerqltagvfqpldksklpewknldpellklvakhdpdnkfampymwattgigynvdkvk
avlgenapvdswdlilkpenleklkscgvsfldapeevfatvlnylgkdpnstkaddytg
patdlllklrpniryfhssqyindlangdicvaigwagdvwqasnrakeakngvnvsfsi
pkegamaffdvfampadaknkdeayqflnyllrpdvvahisdhvfyanankaatplvsae
vrenpgiyppadvraklftlkvqdpkidrvrtrawtkvks