PDB entry 6xd9
View 6xd9 on RCSB PDB site
Description: Carbonmonoxy hemoglobin in complex with the antisickling agent 2-hydroxy-6-((6-(hydroxymethyl)pyridin-2-yl)methoxy)benzaldehyde (VZHE039)
Class: oxygen transport
Keywords: Hemoglobin, Aromatic aldehyde, Antisickling, Allosteric effector, OXYGEN TRANSPORT
Deposited on
2020-06-10, released
2020-12-23
The last revision prior to the SCOPe 2.07 freeze date was dated
2020-12-23, with a file datestamp of
2020-12-18.
Experiment type: XRAY
Resolution: 2.1 Å
R-factor: N/A
AEROSPACI score: 0.4
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: Hemoglobin subunit alpha
Species: Homo sapiens [TaxId:9606]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.07: d6xd9a_ - Chain 'B':
Compound: Hemoglobin subunit beta
Species: Homo sapiens [TaxId:9606]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.07: d6xd9b_ - Chain 'C':
Compound: Hemoglobin subunit alpha
Species: Homo sapiens [TaxId:9606]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.07: d6xd9c_ - Chain 'D':
Compound: Hemoglobin subunit beta
Species: Homo sapiens [TaxId:9606]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.07: d6xd9d_ - Heterogens: V39, CMO, HEM, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence; same for both SEQRES and ATOM records: (download)
>6xd9A (A:)
vlspadktnvkaawgkvgahageygaealermflsfpttktyfphfdlshgsaqvkghgk
kvadaltnavahvddmpnalsalsdlhahklrvdpvnfkllshcllvtlaahlpaeftpa
vhasldkflasvstvltskyr
- Chain 'B':
Sequence; same for both SEQRES and ATOM records: (download)
>6xd9B (B:)
vhltpeeksavtalwgkvnvdevggealgrllvvypwtqrffesfgdlstpdavmgnpkv
kahgkkvlgafsdglahldnlkgtfatlselhcdklhvdpenfrllgnvlvcvlahhfgk
eftppvqaayqkvvagvanalahkyh
- Chain 'C':
Sequence; same for both SEQRES and ATOM records: (download)
>6xd9C (C:)
vlspadktnvkaawgkvgahageygaealermflsfpttktyfphfdlshgsaqvkghgk
kvadaltnavahvddmpnalsalsdlhahklrvdpvnfkllshcllvtlaahlpaeftpa
vhasldkflasvstvltskyr
- Chain 'D':
Sequence; same for both SEQRES and ATOM records: (download)
>6xd9D (D:)
vhltpeeksavtalwgkvnvdevggealgrllvvypwtqrffesfgdlstpdavmgnpkv
kahgkkvlgafsdglahldnlkgtfatlselhcdklhvdpenfrllgnvlvcvlahhfgk
eftppvqaayqkvvagvanalahkyh