PDB entry 6x05

View 6x05 on RCSB PDB site
Description: Nup133 (aa55-481) from S. cerevisiae bound by VHH-SAN4
Class: structural protein
Keywords: STRUCTURAL PROTEIN, Nucleoporin, Nanobody
Deposited on 2020-05-15, released 2020-12-09
The last revision prior to the SCOPe 2.07 freeze date was dated 2020-12-09, with a file datestamp of 2020-12-04.
Experiment type: XRAY
Resolution: 2.1 Å
R-factor: N/A
AEROSPACI score: 0.35 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Nucleoporin NUP133
    Species: Saccharomyces cerevisiae (strain ATCC 204508 / S288c) [TaxId:559292]
    Gene: NUP133, RAT3, YKR082W, YKR402
    Database cross-references and differences (RAF-indexed):
  • Chain 'K':
    Compound: vhh-san4
    Species: Vicugna pacos [TaxId:30538]
    Database cross-references and differences (RAF-indexed):
    • PDB 6X05 (Start-121)
    Domains in SCOPe 2.07: d6x05k_
  • Heterogens: HOH

PDB Chain Sequences:

  • Chain 'A':
    No sequence available.

  • Chain 'K':
    Sequence, based on SEQRES records: (download) 
    >6x05K (K:)
qlqlvesgggsvqaggsltlsctasesiskrihgigwfrqrrgeqreeiayittggrpnl
gdsvkdrftisrdksngtvylqmnslkpedtavyychgrgrwwgtegrldywgqgtqvtv
ss

    Sequence, based on observed residues (ATOM records): (download) 
    >6x05K (K:)
qlvesgggsvqaggsltlsctasesiskrihgigwfrqrrgeqreeiayittggrpnlgd
svkdrftisrdksngtvylqmnslkpedtavyychgrgrwwgtegrldywgqgtqvtvss