PDB entry 6vjk

View 6vjk on RCSB PDB site
Description: Streptavidin mutant M88 (N49C/A86C)
Class: Biotin-binding protein
Keywords: Biotin-binding protein, ANTIMICROBIAL PROTEIN
Deposited on 2020-01-16, released 2020-12-23
The last revision prior to the SCOPe 2.08 freeze date was dated 2020-12-23, with a file datestamp of 2020-12-18.
Experiment type: XRAY
Resolution: 1.6 Å
R-factor: N/A
AEROSPACI score: 0.52 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: streptavidin
    Species: Streptomyces avidinii [TaxId:1895]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P22629 (Start-123)
      • engineered mutation (36)
      • engineered mutation (73)
    Domains in SCOPe 2.08: d6vjka_
  • Chain 'B':
    Compound: streptavidin
    Species: Streptomyces avidinii [TaxId:1895]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P22629
      • engineered mutation (36)
      • engineered mutation (73)
    Domains in SCOPe 2.08: d6vjkb_
  • Chain 'C':
    Compound: streptavidin
    Species: Streptomyces avidinii [TaxId:1895]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P22629
      • engineered mutation (36)
      • engineered mutation (73)
    Domains in SCOPe 2.08: d6vjkc_
  • Chain 'D':
    Compound: streptavidin
    Species: Streptomyces avidinii [TaxId:1895]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P22629 (1-123)
      • engineered mutation (36)
      • engineered mutation (73)
    Domains in SCOPe 2.08: d6vjkd_
  • Chain 'E':
    Compound: streptavidin
    Species: Streptomyces avidinii [TaxId:1895]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P22629
      • engineered mutation (36)
      • engineered mutation (73)
    Domains in SCOPe 2.08: d6vjke_
  • Chain 'F':
    Compound: streptavidin
    Species: Streptomyces avidinii [TaxId:1895]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P22629 (1-123)
      • engineered mutation (36)
      • engineered mutation (73)
    Domains in SCOPe 2.08: d6vjkf_
  • Chain 'G':
    Compound: streptavidin
    Species: Streptomyces avidinii [TaxId:1895]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P22629 (1-End)
      • engineered mutation (36)
      • engineered mutation (73)
    Domains in SCOPe 2.08: d6vjkg_
  • Chain 'H':
    Compound: streptavidin
    Species: Streptomyces avidinii [TaxId:1895]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P22629 (1-123)
      • engineered mutation (36)
      • engineered mutation (73)
    Domains in SCOPe 2.08: d6vjkh_
  • Chain 'I':
    Compound: streptavidin
    Species: Streptomyces avidinii [TaxId:1895]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P22629
      • engineered mutation (36)
      • engineered mutation (73)
    Domains in SCOPe 2.08: d6vjki_
  • Chain 'J':
    Compound: streptavidin
    Species: Streptomyces avidinii [TaxId:1895]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P22629
      • engineered mutation (36)
      • engineered mutation (73)
    Domains in SCOPe 2.08: d6vjkj_
  • Chain 'K':
    Compound: streptavidin
    Species: Streptomyces avidinii [TaxId:1895]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P22629
      • engineered mutation (36)
      • engineered mutation (73)
    Domains in SCOPe 2.08: d6vjkk_
  • Chain 'L':
    Compound: streptavidin
    Species: Streptomyces avidinii [TaxId:1895]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P22629
      • engineered mutation (36)
      • engineered mutation (73)
    Domains in SCOPe 2.08: d6vjkl_
  • Heterogens: BTN, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >6vjkA (A:)
meagitgtwynqlgstfivtagadgaltgtyesavgcaesryvltgrydsapatdgsgta
lgwtvawknnyrnchsattwsgqyvggaearintqwlltsgtteanawkstlvghdtftk
vkps

    Sequence, based on observed residues (ATOM records): (download) 
    >6vjkA (A:)
agitgtwynqlgstfivtagadgaltgtyesavgcaesryvltgrydsapatdgsgtalg
wtvawknnyrnchsattwsgqyvggaearintqwlltsgtteanawkstlvghdtftkvk
ps

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >6vjkB (B:)
meagitgtwynqlgstfivtagadgaltgtyesavgcaesryvltgrydsapatdgsgta
lgwtvawknnyrnchsattwsgqyvggaearintqwlltsgtteanawkstlvghdtftk
vkps

    Sequence, based on observed residues (ATOM records): (download) 
    >6vjkB (B:)
agitgtwynqlgstfivtagadgaltgtyesavgcaesryvltgrydsapatdgsgtalg
wtvawknnyrnchsattwsgqyvggaearintqwlltsgtteanawkstlvghdtftk

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >6vjkC (C:)
meagitgtwynqlgstfivtagadgaltgtyesavgcaesryvltgrydsapatdgsgta
lgwtvawknnyrnchsattwsgqyvggaearintqwlltsgtteanawkstlvghdtftk
vkps

    Sequence, based on observed residues (ATOM records): (download) 
    >6vjkC (C:)
agitgtwynqlgstfivtagadgaltgtyesavgcaesryvltgrydsapatdgsgtalg
wtvawknnyrnchsattwsgqyvggaearintqwlltsgtteanawkstlvghdtftkvk

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >6vjkD (D:)
meagitgtwynqlgstfivtagadgaltgtyesavgcaesryvltgrydsapatdgsgta
lgwtvawknnyrnchsattwsgqyvggaearintqwlltsgtteanawkstlvghdtftk
vkps

    Sequence, based on observed residues (ATOM records): (download) 
    >6vjkD (D:)
eagitgtwynqlgstfivtagadgaltgtyesavgcaesryvltgrydsapatdgsgtal
gwtvawknnyrnchsattwsgqyvggaearintqwlltsgtteanawkstlvghdtftkv
kps

  • Chain 'E':
    Sequence, based on SEQRES records: (download) 
    >6vjkE (E:)
meagitgtwynqlgstfivtagadgaltgtyesavgcaesryvltgrydsapatdgsgta
lgwtvawknnyrnchsattwsgqyvggaearintqwlltsgtteanawkstlvghdtftk
vkps

    Sequence, based on observed residues (ATOM records): (download) 
    >6vjkE (E:)
gitgtwynqlgstfivtagadgaltgtyesavgcaesryvltgrydsapatdgsgtalgw
tvawknnyrnchsattwsgqyvggaearintqwlltsgtteanawkstlvghdtftkvkp
s

  • Chain 'F':
    Sequence, based on SEQRES records: (download) 
    >6vjkF (F:)
meagitgtwynqlgstfivtagadgaltgtyesavgcaesryvltgrydsapatdgsgta
lgwtvawknnyrnchsattwsgqyvggaearintqwlltsgtteanawkstlvghdtftk
vkps

    Sequence, based on observed residues (ATOM records): (download) 
    >6vjkF (F:)
eagitgtwynqlgstfivtagadgaltgtyesavgcaesryvltgrydsapatdgsgtal
gwtvawknnyrnchsattwsgqyvggaearintqwlltsgtteanawkstlvghdtftkv
kps

  • Chain 'G':
    Sequence, based on SEQRES records: (download) 
    >6vjkG (G:)
meagitgtwynqlgstfivtagadgaltgtyesavgcaesryvltgrydsapatdgsgta
lgwtvawknnyrnchsattwsgqyvggaearintqwlltsgtteanawkstlvghdtftk
vkps

    Sequence, based on observed residues (ATOM records): (download) 
    >6vjkG (G:)
eagitgtwynqlgstfivtagadgaltgtyesavgcaesryvltgrydsapatdgsgtal
gwtvawknnyrnchsattwsgqyvggaearintqwlltsgtteanawkstlvghdtftkv
kps

  • Chain 'H':
    Sequence, based on SEQRES records: (download) 
    >6vjkH (H:)
meagitgtwynqlgstfivtagadgaltgtyesavgcaesryvltgrydsapatdgsgta
lgwtvawknnyrnchsattwsgqyvggaearintqwlltsgtteanawkstlvghdtftk
vkps

    Sequence, based on observed residues (ATOM records): (download) 
    >6vjkH (H:)
eagitgtwynqlgstfivtagadgaltgtyesavgcaesryvltgrydsapatdgsgtal
gwtvawknnyrnchsattwsgqyvggaearintqwlltsgtteanawkstlvghdtftkv
kps

  • Chain 'I':
    Sequence, based on SEQRES records: (download) 
    >6vjkI (I:)
meagitgtwynqlgstfivtagadgaltgtyesavgcaesryvltgrydsapatdgsgta
lgwtvawknnyrnchsattwsgqyvggaearintqwlltsgtteanawkstlvghdtftk
vkps

    Sequence, based on observed residues (ATOM records): (download) 
    >6vjkI (I:)
agitgtwynqlgstfivtagadgaltgtyesavgcaesryvltgrydsapatdgsgtalg
wtvawknnyrnchsattwsgqyvggaearintqwlltsgtteanawkstlvghdtftkvk
p

  • Chain 'J':
    Sequence, based on SEQRES records: (download) 
    >6vjkJ (J:)
meagitgtwynqlgstfivtagadgaltgtyesavgcaesryvltgrydsapatdgsgta
lgwtvawknnyrnchsattwsgqyvggaearintqwlltsgtteanawkstlvghdtftk
vkps

    Sequence, based on observed residues (ATOM records): (download) 
    >6vjkJ (J:)
gitgtwynqlgstfivtagadgaltgtyesavgcaesryvltgrydsapatdgsgtalgw
tvawknnyrnchsattwsgqyvggaearintqwlltsgtteanawkstlvghdtftkvk

  • Chain 'K':
    Sequence, based on SEQRES records: (download) 
    >6vjkK (K:)
meagitgtwynqlgstfivtagadgaltgtyesavgcaesryvltgrydsapatdgsgta
lgwtvawknnyrnchsattwsgqyvggaearintqwlltsgtteanawkstlvghdtftk
vkps

    Sequence, based on observed residues (ATOM records): (download) 
    >6vjkK (K:)
agitgtwynqlgstfivtagadgaltgtyesavgcaesryvltgrydsapatdgsgtalg
wtvawknnyrnchsattwsgqyvggaearintqwlltsgtteanawkstlvghdtftkvk

  • Chain 'L':
    Sequence, based on SEQRES records: (download) 
    >6vjkL (L:)
meagitgtwynqlgstfivtagadgaltgtyesavgcaesryvltgrydsapatdgsgta
lgwtvawknnyrnchsattwsgqyvggaearintqwlltsgtteanawkstlvghdtftk
vkps

    Sequence, based on observed residues (ATOM records): (download) 
    >6vjkL (L:)
agitgtwynqlgstfivtagadgaltgtyesavgcaesryvltgrydsapatdgsgtalg
wtvawknnyrnchsattwsgqyvggaearintqwlltsgtteanawkstlvghdtftkv