PDB entry 6ute

View 6ute on RCSB PDB site
Description: Crystal structure of Z032 Fab in complex with WNV EDIII
Class: viral protein
Keywords: viral protein
Deposited on 2019-10-29, released 2020-04-15
The last revision prior to the SCOPe 2.08 freeze date was dated 2020-05-20, with a file datestamp of 2020-05-15.
Experiment type: XRAY
Resolution: 2.9 Å
R-factor: N/A
AEROSPACI score: 0.15 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Z032 Fab heavy chain
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • PDB 6UTE (0-109)
    • Uniprot S6B291 (110-End)
    Domains in SCOPe 2.08: d6utea_
  • Chain 'B':
    Compound: Z032 Fab light chain
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • PDB 6UTE (0-107)
    • Uniprot P0DOX7 (108-End)
    Domains in SCOPe 2.08: d6uteb1, d6uteb2
  • Chain 'C':
    Compound: Z032 Fab heavy chain
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • PDB 6UTE (0-109)
    • Uniprot S6B291 (110-End)
    Domains in SCOPe 2.08: d6utec_
  • Chain 'D':
    Compound: Z032 Fab light chain
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • PDB 6UTE (0-107)
    • Uniprot P0DOX7 (108-End)
    Domains in SCOPe 2.08: d6uted1, d6uted2
  • Chain 'E':
    Compound: Z032 Fab heavy chain
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • PDB 6UTE (0-109)
    • Uniprot S6B291 (110-End)
    Domains in SCOPe 2.08: d6utee_
  • Chain 'F':
    Compound: Z032 Fab light chain
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • PDB 6UTE (0-107)
    • Uniprot P0DOX7 (108-End)
    Domains in SCOPe 2.08: d6utef1, d6utef2
  • Chain 'G':
    Compound: Z032 Fab heavy chain
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • PDB 6UTE (0-109)
    • Uniprot S6B291 (110-End)
    Domains in SCOPe 2.08: d6uteg_
  • Chain 'H':
    Compound: Z032 Fab light chain
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • PDB 6UTE (0-107)
    • Uniprot P0DOX7 (108-End)
    Domains in SCOPe 2.08: d6uteh1, d6uteh2
  • Chain 'I':
    Compound: Z032 Fab heavy chain
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • PDB 6UTE (0-109)
    • Uniprot S6B291 (110-End)
    Domains in SCOPe 2.08: d6utei_
  • Chain 'J':
    Compound: Z032 Fab light chain
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • PDB 6UTE (0-107)
    • Uniprot P0DOX7 (108-End)
    Domains in SCOPe 2.08: d6utej1, d6utej2
  • Chain 'S':
    Compound: Envelope domain III
    Species: West Nile virus [TaxId:11082]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6utes_
  • Heterogens: GOL

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download)
    >6uteA (A:)
    evqllesggrlvqpggsltlscaasgfpfstyamswlrqapgkglewvsgitgdsgstyy
    aasvkgrftisrdnskntlylqmnsltaddtavyycakdrlhsglgelfsywgqgtlvtv
    ssastkgpsvfplapsskstsggtaalgclvkdyfpepvtvswnsgaltsgvhtfpavlq
    ssglyslssvvtvpssslgtqtyicnvnhkpsntkvdkrvepkscdkthhhhhh
    

    Sequence, based on observed residues (ATOM records): (download)
    >6uteA (A:)
    evqllesggrlvqpggsltlscaasgfpfstyamswlrqapgkglewvsgitgdsgstyy
    aasvkgrftisrdnskntlylqmnsltaddtavyycakdrlhsglgelfsywgqgtlvtv
    ssastkgpsvfplapsskstsggtaalgclvkdyfpepvtvswnsgaltsgvhtfpavlq
    ssglyslssvvtvpssslgtqtyicnvnhkpsntkvdkrvepk
    

  • Chain 'B':
    Sequence, based on SEQRES records: (download)
    >6uteB (B:)
    diqmtqspstlsasvgdrvnitcrasqsinqwlawyqqkpgkapkflmykastletgvps
    rfsgsgsgteftltisslqpddfatyycqhyfsypwtfgqgtkveikrtvaapsvfifpp
    sdeqlksgtasvvcllnnfypreakvqwkvdnalqsgnsqesvteqdskdstyslsstlt
    lskadyekhkvyacevthqglsspvtksfnrgec
    

    Sequence, based on observed residues (ATOM records): (download)
    >6uteB (B:)
    diqmtqspstlsasvgdrvnitcrasqsinqwlawyqqkpgkapkflmykastletgvps
    rfsgsgsgteftltisslqpddfatyycqhyfsypwtfgqgtkveikrtvaapsvfifpp
    sdeqlksgtasvvcllnnfypreakvqwkvdnalqsgnsqesvteqdskdstyslsstlt
    lskadyekhkvyacevthqglsspvtksfnrge
    

  • Chain 'C':
    Sequence, based on SEQRES records: (download)
    >6uteC (C:)
    evqllesggrlvqpggsltlscaasgfpfstyamswlrqapgkglewvsgitgdsgstyy
    aasvkgrftisrdnskntlylqmnsltaddtavyycakdrlhsglgelfsywgqgtlvtv
    ssastkgpsvfplapsskstsggtaalgclvkdyfpepvtvswnsgaltsgvhtfpavlq
    ssglyslssvvtvpssslgtqtyicnvnhkpsntkvdkrvepkscdkthhhhhh
    

    Sequence, based on observed residues (ATOM records): (download)
    >6uteC (C:)
    evqllesggrlvqpggsltlscaasgfpfstyamswlrqapgkglewvsgitgdsgstyy
    aasvkgrftisrdnskntlylqmnsltaddtavyycakdrlhsglgelfsywgqgtlvtv
    ssastkgpsvfplapstsggtaalgclvkdyfpepvtvswnsgaltsgvhtfpavlqssg
    lyslssvvtvpssslgtqtyicnvnhkpsntkvdkrvep
    

  • Chain 'D':
    Sequence, based on SEQRES records: (download)
    >6uteD (D:)
    diqmtqspstlsasvgdrvnitcrasqsinqwlawyqqkpgkapkflmykastletgvps
    rfsgsgsgteftltisslqpddfatyycqhyfsypwtfgqgtkveikrtvaapsvfifpp
    sdeqlksgtasvvcllnnfypreakvqwkvdnalqsgnsqesvteqdskdstyslsstlt
    lskadyekhkvyacevthqglsspvtksfnrgec
    

    Sequence, based on observed residues (ATOM records): (download)
    >6uteD (D:)
    diqmtqspstlsasvgdrvnitcrasqsinqwlawyqqkpgkapkflmykastletgvps
    rfsgsgsgteftltisslqpddfatyycqhyfsypwtfgqgtkveikrtvaapsvfifpp
    sdeqlksgtasvvcllnnfypreakvqwkvdnalqsgnsqesvteqdskdstyslsstlt
    lskadyekhkvyacevthqglsspvtksfnrge
    

  • Chain 'E':
    Sequence, based on SEQRES records: (download)
    >6uteE (E:)
    evqllesggrlvqpggsltlscaasgfpfstyamswlrqapgkglewvsgitgdsgstyy
    aasvkgrftisrdnskntlylqmnsltaddtavyycakdrlhsglgelfsywgqgtlvtv
    ssastkgpsvfplapsskstsggtaalgclvkdyfpepvtvswnsgaltsgvhtfpavlq
    ssglyslssvvtvpssslgtqtyicnvnhkpsntkvdkrvepkscdkthhhhhh
    

    Sequence, based on observed residues (ATOM records): (download)
    >6uteE (E:)
    evqllesggrlvqpggsltlscaasgfpfstyamswlrqapgkglewvsgitgdsgstyy
    aasvkgrftisrdnskntlylqmnsltaddtavyycakdrlhsglgelfsywgqgtlvtv
    ssastkgpsvfplapsstsggtaalgclvkdyfpepvtvswnsgaltsgvhtfpavlqss
    glyslssvvtvpssslgtqtyicnvnhkpsntkvdkrvep
    

  • Chain 'F':
    Sequence, based on SEQRES records: (download)
    >6uteF (F:)
    diqmtqspstlsasvgdrvnitcrasqsinqwlawyqqkpgkapkflmykastletgvps
    rfsgsgsgteftltisslqpddfatyycqhyfsypwtfgqgtkveikrtvaapsvfifpp
    sdeqlksgtasvvcllnnfypreakvqwkvdnalqsgnsqesvteqdskdstyslsstlt
    lskadyekhkvyacevthqglsspvtksfnrgec
    

    Sequence, based on observed residues (ATOM records): (download)
    >6uteF (F:)
    diqmtqspstlsasvgdrvnitcrasqsinqwlawyqqkpgkapkflmykastletgvps
    rfsgsgsgteftltisslqpddfatyycqhyfsypwtfgqgtkveikrtvaapsvfifpp
    sdeqlksgtasvvcllnnfypreakvqwkvdnalqsgnsqesvteqdskdstyslsstlt
    lskadyekhkvyacevthqglsspvtksfnrge
    

  • Chain 'G':
    Sequence, based on SEQRES records: (download)
    >6uteG (G:)
    evqllesggrlvqpggsltlscaasgfpfstyamswlrqapgkglewvsgitgdsgstyy
    aasvkgrftisrdnskntlylqmnsltaddtavyycakdrlhsglgelfsywgqgtlvtv
    ssastkgpsvfplapsskstsggtaalgclvkdyfpepvtvswnsgaltsgvhtfpavlq
    ssglyslssvvtvpssslgtqtyicnvnhkpsntkvdkrvepkscdkthhhhhh
    

    Sequence, based on observed residues (ATOM records): (download)
    >6uteG (G:)
    evqllesggrlvqpggsltlscaasgfpfstyamswlrqapgkglewvsgitgdsgstyy
    aasvkgrftisrdnskntlylqmnsltaddtavyycakdrlhsglgelfsywgqgtlvtv
    ssastkgpsvfplapsskstsggtaalgclvkdyfpepvtvswnsgaltsgvhtfpavlq
    ssglyslssvvtvpssslgtqtyicnvnhkpsntkvdkrvepk
    

  • Chain 'H':
    Sequence, based on SEQRES records: (download)
    >6uteH (H:)
    diqmtqspstlsasvgdrvnitcrasqsinqwlawyqqkpgkapkflmykastletgvps
    rfsgsgsgteftltisslqpddfatyycqhyfsypwtfgqgtkveikrtvaapsvfifpp
    sdeqlksgtasvvcllnnfypreakvqwkvdnalqsgnsqesvteqdskdstyslsstlt
    lskadyekhkvyacevthqglsspvtksfnrgec
    

    Sequence, based on observed residues (ATOM records): (download)
    >6uteH (H:)
    diqmtqspstlsasvgdrvnitcrasqsinqwlawyqqkpgkapkflmykastletgvps
    rfsgsgsgteftltisslqpddfatyycqhyfsypwtfgqgtkveikrtvaapsvfifpp
    sdeqlksgtasvvcllnnfypreakvqwkvdnqsgnsqesvteqdskdstyslsstltls
    kadyekhkvyacevthqglsspvtksnrge
    

  • Chain 'I':
    Sequence, based on SEQRES records: (download)
    >6uteI (I:)
    evqllesggrlvqpggsltlscaasgfpfstyamswlrqapgkglewvsgitgdsgstyy
    aasvkgrftisrdnskntlylqmnsltaddtavyycakdrlhsglgelfsywgqgtlvtv
    ssastkgpsvfplapsskstsggtaalgclvkdyfpepvtvswnsgaltsgvhtfpavlq
    ssglyslssvvtvpssslgtqtyicnvnhkpsntkvdkrvepkscdkthhhhhh
    

    Sequence, based on observed residues (ATOM records): (download)
    >6uteI (I:)
    evqllesggrlvqpggsltlscaasgfpfstyamswlrqapgkglewvsgitgdsgstyy
    aasvkgrftisrdnskntlylqmnsltaddtavyycakdrlhsglgelfsywgqgtlvtv
    ssastkgpsvfplapsskstsggtaalgclvkdyfpepvtvswnsgaltsgvhtfpavlq
    ssglyslssvvtvpssslgtqtyicnvnhkpsntkvdkrvepks
    

  • Chain 'J':
    Sequence, based on SEQRES records: (download)
    >6uteJ (J:)
    diqmtqspstlsasvgdrvnitcrasqsinqwlawyqqkpgkapkflmykastletgvps
    rfsgsgsgteftltisslqpddfatyycqhyfsypwtfgqgtkveikrtvaapsvfifpp
    sdeqlksgtasvvcllnnfypreakvqwkvdnalqsgnsqesvteqdskdstyslsstlt
    lskadyekhkvyacevthqglsspvtksfnrgec
    

    Sequence, based on observed residues (ATOM records): (download)
    >6uteJ (J:)
    diqmtqspstlsasvgdrvnitcrasqsinqwlawyqqkpgkapkflmykastletgvps
    rfsgsgsgteftltisslqpddfatyycqhyfsypwtfgqgtkveikrtvaapsvfifpp
    sdeqlksgtasvvcllnnfypreakvqwkvdnalqsgnsqesvteqdskdstyslsstlt
    lskadyekhkvyacevthqglsspvtksfnrge
    

  • Chain 'S':
    Sequence; same for both SEQRES and ATOM records: (download)
    >6uteS (S:)
    gvcskafkflgtpadtghgtvvlelqytgtdgpckvpissvaslndltpvgrlvtvnpfv
    svatanakvlieleppfgdsyivvgrgeqqinhhwhks