PDB entry 6ump

View 6ump on RCSB PDB site
Description: Crystal structure of MavC in complex with substrate mimic in P65 space group
Class: transferase
Keywords: Legionella, Effector, Transglutaminase, Ubiquitination, Complex, TRANSFERASE
Deposited on 2019-10-10, released 2020-05-27
The last revision prior to the SCOPe 2.07 freeze date was dated 2020-05-27, with a file datestamp of 2020-05-22.
Experiment type: XRAY
Resolution: 2.8 Å
R-factor: N/A
AEROSPACI score: 0.16 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: MavC
    Species: Legionella pneumophila [TaxId:446]
    Gene: C3927_10720
    Database cross-references and differences (RAF-indexed):
    • Uniprot A0A2S6F4I5 (Start-388)
      • engineered mutation (78)
  • Chain 'C':
    Compound: Ubiquitin-conjugating enzyme E2 N
    Species: Homo sapiens [TaxId:9606]
    Gene: UBE2N, BLU
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d6umpc_
  • Chain 'E':
    Compound: Ubiquitin
    Species: Homo sapiens [TaxId:9606]
    Gene: UBC
    Database cross-references and differences (RAF-indexed):
    • Uniprot P0CG48 (0-75)
      • engineered mutation (75)
    Domains in SCOPe 2.07: d6umpe_

PDB Chain Sequences:

  • Chain 'A':
    No sequence available.

  • Chain 'C':
    Sequence, based on SEQRES records: (download)
    >6umpC (C:)
    maglprriiketqrllaepvpgikaepdesnaryfhvviagpqdspfeggtfklelflpe
    eypmaapkvrfmtkiyhpnvdklgricldilkdkwspalqirtvllsiqallsapnpddp
    landvaeqwktneaqaietarawtrlyamnni
    

    Sequence, based on observed residues (ATOM records): (download)
    >6umpC (C:)
    glprriiketqrllaepvpgikaepdesnaryfhvviagpqdspfeggtfklelflpeey
    pmaapkvrfmtkiyhpnvdklgricldilkdkwspalqirtvllsiqallsapnpddpla
    ndvaeqwktneaqaietarawtrlyamnni
    

  • Chain 'E':
    Sequence; same for both SEQRES and ATOM records: (download)
    >6umpE (E:)
    mqifvktltgktitlevepsdtienvkakiqdkegippdqqrlifagkqledgrtlsdyn
    iqkestlhlvlrlrgc