PDB entry 6tdo
View 6tdo on RCSB PDB site
Description: Crystal structure of the disulfide engineered HLA-A0201 molecule in complex with one GM dipeptide in the A pocket.
Class: immune system
Keywords: MHC Class I molecule, IMMUNE SYSTEM
Deposited on
2019-11-09, released
2020-03-25
The last revision prior to the SCOPe 2.08 freeze date was dated
2020-03-25, with a file datestamp of
2020-03-20.
Experiment type: XRAY
Resolution: 1.65 Å
R-factor: N/A
AEROSPACI score: 0.42
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: MHC class I antigen
Species: Homo sapiens [TaxId:9606]
Gene: HLA-A
Database cross-references and differences (RAF-indexed):
- Uniprot F6IQS1
- conflict (84)
- conflict (139)
- conflict (245)
Domains in SCOPe 2.08: d6tdoa1, d6tdoa2 - Chain 'B':
Compound: Beta-2-microglobulin
Species: Homo sapiens [TaxId:9606]
Gene: B2M, CDABP0092, HDCMA22P
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d6tdob_ - Heterogens: GOL, GLY, MET, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>6tdoA (A:)
agshsmryfftsvsrpgrgeprfiavgyvddtqfvrfdsdaasqrmeprapwieqegpey
wdgetrkvkahsqthrvdlgtlrgcynqseagshtvqrmygcdvgsdwrflrgyhqyayd
gkdyialkedlrswtaadmcaqttkhkweaahvaeqlraylegtcvewlrrylengketl
qrtdapkthmthhavsdheatlrcwalsfypaeitltwqrdgedqtqdtelvetrpagdg
tfqkwvavvvpsgqeqrytchvqheglpkpltlrwe
Sequence, based on observed residues (ATOM records): (download)
>6tdoA (A:)
gshsmryfftsvsrpgrgeprfiavgyvddtqfvrfdsdaasqrmeprapwieqegpeyw
dgetrkvkahsqthrvdlgtlrgcynqseagshtvqrmygcdvgsdwrflrgyhqyaydg
kdyialkedlrswtaadmcaqttkhkweaahvaeqlraylegtcvewlrrylengketlq
rtdapkthmthhavsdheatlrcwalsfypaeitltwqrdgedqtqdtelvetrpagdgt
fqkwvavvvpsgqeqrytchvqheglpkpltlrw
- Chain 'B':
Sequence, based on SEQRES records: (download)
>6tdoB (B:)
miqrtpkiqvysrhpaengksnflncyvsgfhpsdievdllkngeriekvehsdlsfskd
wsfyllyyteftptekdeyacrvnhvtlsqpkivkwdrdm
Sequence, based on observed residues (ATOM records): (download)
>6tdoB (B:)
iqrtpkiqvysrhpaengksnflncyvsgfhpsdievdllkngeriekvehsdlsfskdw
sfyllyyteftptekdeyacrvnhvtlsqpkivkwdrdm