SCOPe 2.08: Structural Classification of Proteins

PDB entry 6sv1

View 6sv1 on RCSB PDB site
Description: Crystal structure of Rhodospirillum rubrum Rru_A0973 E34A variant
Class: oxidoreductase
Keywords: Encapsulated ferritin, ferroxidase, ferritin, OXIDOREDUCTASE
Deposited on 2019-09-17, released 2020-09-23
The last revision prior to the SCOPe 2.08 freeze date was dated 2020-11-25, with a file datestamp of 2020-11-20.
Experiment type: XRAY
Resolution: 2.19 Å
R-factor: N/A
AEROSPACI score: 0.38 (click here for full SPACI score report)

Chains and heterogens:

Chain 'A':
Compound: encapsulated ferritin
Species: Rhodospirillum rubrum [TaxId:1085]
Gene: Rru_A0973
Database cross-references and differences (RAF-indexed):
- Uniprot Q2RVS1 (Start-95)
  - engineered mutation (33)
  - expression tag (96)
Domains in SCOPe 2.08: d6sv1a1, d6sv1a2
Chain 'B':
Compound: encapsulated ferritin
Species: Rhodospirillum rubrum [TaxId:1085]
Gene: Rru_A0973
Database cross-references and differences (RAF-indexed):
- Uniprot Q2RVS1 (Start-95)
  - engineered mutation (33)
  - expression tag (96)
Chain 'C':
Compound: encapsulated ferritin
Species: Rhodospirillum rubrum [TaxId:1085]
Gene: Rru_A0973
Database cross-references and differences (RAF-indexed):
- Uniprot Q2RVS1 (Start-95)
  - engineered mutation (33)
  - expression tag (96)
Domains in SCOPe 2.08: d6sv1c1, d6sv1c2
Chain 'D':
Compound: encapsulated ferritin
Species: Rhodospirillum rubrum [TaxId:1085]
Gene: Rru_A0973
Database cross-references and differences (RAF-indexed):
- Uniprot Q2RVS1 (Start-95)
  - engineered mutation (33)
  - expression tag (96)
Domains in SCOPe 2.08: d6sv1d1, d6sv1d2
Chain 'E':
Compound: encapsulated ferritin
Species: Rhodospirillum rubrum [TaxId:1085]
Gene: Rru_A0973
Database cross-references and differences (RAF-indexed):
- Uniprot Q2RVS1 (Start-95)
  - engineered mutation (33)
  - expression tag (96)
Domains in SCOPe 2.08: d6sv1e1, d6sv1e2
Chain 'F':
Compound: encapsulated ferritin
Species: Rhodospirillum rubrum [TaxId:1085]
Gene: Rru_A0973
Database cross-references and differences (RAF-indexed):
- Uniprot Q2RVS1 (Start-95)
  - engineered mutation (33)
  - expression tag (96)
Domains in SCOPe 2.08: d6sv1f1, d6sv1f2
Chain 'G':
Compound: encapsulated ferritin
Species: Rhodospirillum rubrum [TaxId:1085]
Gene: Rru_A0973
Database cross-references and differences (RAF-indexed):
- Uniprot Q2RVS1 (Start-95)
  - engineered mutation (33)
  - expression tag (96)
Domains in SCOPe 2.08: d6sv1g1, d6sv1g2
Chain 'H':
Compound: encapsulated ferritin
Species: Rhodospirillum rubrum [TaxId:1085]
Gene: Rru_A0973
Database cross-references and differences (RAF-indexed):
- Uniprot Q2RVS1 (Start-95)
  - engineered mutation (33)
Domains in SCOPe 2.08: d6sv1h_
Chain 'I':
Compound: encapsulated ferritin
Species: Rhodospirillum rubrum [TaxId:1085]
Gene: Rru_A0973
Database cross-references and differences (RAF-indexed):
- Uniprot Q2RVS1 (Start-95)
  - engineered mutation (33)
  - expression tag (96)
Domains in SCOPe 2.08: d6sv1i1, d6sv1i2
Chain 'J':
Compound: encapsulated ferritin
Species: Rhodospirillum rubrum [TaxId:1085]
Gene: Rru_A0973
Database cross-references and differences (RAF-indexed):
- Uniprot Q2RVS1
  - engineered mutation (33)
Domains in SCOPe 2.08: d6sv1j_
Chain 'K':
Compound: encapsulated ferritin
Species: Rhodospirillum rubrum [TaxId:1085]
Gene: Rru_A0973
Database cross-references and differences (RAF-indexed):
- Uniprot Q2RVS1 (Start-95)
  - engineered mutation (33)
  - expression tag (96)
Domains in SCOPe 2.08: d6sv1k1, d6sv1k2
Chain 'L':
Compound: encapsulated ferritin
Species: Rhodospirillum rubrum [TaxId:1085]
Gene: Rru_A0973
Database cross-references and differences (RAF-indexed):
- Uniprot Q2RVS1
  - engineered mutation (33)
Domains in SCOPe 2.08: d6sv1l_
Chain 'M':
Compound: encapsulated ferritin
Species: Rhodospirillum rubrum [TaxId:1085]
Gene: Rru_A0973
Database cross-references and differences (RAF-indexed):
- Uniprot Q2RVS1
  - engineered mutation (33)
Domains in SCOPe 2.08: d6sv1m_
Chain 'N':
Compound: encapsulated ferritin
Species: Rhodospirillum rubrum [TaxId:1085]
Gene: Rru_A0973
Database cross-references and differences (RAF-indexed):
- Uniprot Q2RVS1
  - engineered mutation (33)
Domains in SCOPe 2.08: d6sv1n_
Chain 'O':
Compound: encapsulated ferritin
Species: Rhodospirillum rubrum [TaxId:1085]
Gene: Rru_A0973
Database cross-references and differences (RAF-indexed):
- Uniprot Q2RVS1
  - engineered mutation (33)
Domains in SCOPe 2.08: d6sv1o_
Chain 'P':
Compound: encapsulated ferritin
Species: Rhodospirillum rubrum [TaxId:1085]
Gene: Rru_A0973
Database cross-references and differences (RAF-indexed):
- Uniprot Q2RVS1 (Start-95)
  - engineered mutation (33)
Domains in SCOPe 2.08: d6sv1p_
Chain 'Q':
Compound: encapsulated ferritin
Species: Rhodospirillum rubrum [TaxId:1085]
Gene: Rru_A0973
Database cross-references and differences (RAF-indexed):
- Uniprot Q2RVS1
  - engineered mutation (33)
Domains in SCOPe 2.08: d6sv1q_
Chain 'R':
Compound: encapsulated ferritin
Species: Rhodospirillum rubrum [TaxId:1085]
Gene: Rru_A0973
Database cross-references and differences (RAF-indexed):
- Uniprot Q2RVS1
  - engineered mutation (33)
Domains in SCOPe 2.08: d6sv1r_
Chain 'S':
Compound: encapsulated ferritin
Species: Rhodospirillum rubrum [TaxId:1085]
Gene: Rru_A0973
Database cross-references and differences (RAF-indexed):
- Uniprot Q2RVS1 (Start-95)
  - engineered mutation (33)
  - expression tag (96)
Domains in SCOPe 2.08: d6sv1s1, d6sv1s2
Chain 'T':
Compound: encapsulated ferritin
Species: Rhodospirillum rubrum [TaxId:1085]
Gene: Rru_A0973
Database cross-references and differences (RAF-indexed):
- Uniprot Q2RVS1 (Start-95)
  - engineered mutation (33)
  - expression tag (96)
Domains in SCOPe 2.08: d6sv1t1, d6sv1t2
Chain 'U':
Compound: encapsulated ferritin
Species: Rhodospirillum rubrum [TaxId:1085]
Gene: Rru_A0973
Database cross-references and differences (RAF-indexed):
- Uniprot Q2RVS1
  - engineered mutation (33)
Domains in SCOPe 2.08: d6sv1u_
Chain 'V':
Compound: encapsulated ferritin
Species: Rhodospirillum rubrum [TaxId:1085]
Gene: Rru_A0973
Database cross-references and differences (RAF-indexed):
- Uniprot Q2RVS1 (Start-95)
  - engineered mutation (33)
  - expression tag (96)
Domains in SCOPe 2.08: d6sv1v1, d6sv1v2
Chain 'W':
Compound: encapsulated ferritin
Species: Rhodospirillum rubrum [TaxId:1085]
Gene: Rru_A0973
Database cross-references and differences (RAF-indexed):
- Uniprot Q2RVS1 (Start-95)
  - engineered mutation (33)
  - expression tag (96)
Domains in SCOPe 2.08: d6sv1w1, d6sv1w2
Chain 'X':
Compound: encapsulated ferritin
Species: Rhodospirillum rubrum [TaxId:1085]
Gene: Rru_A0973
Database cross-references and differences (RAF-indexed):
- Uniprot Q2RVS1 (Start-95)
  - engineered mutation (33)
  - expression tag (96)
Domains in SCOPe 2.08: d6sv1x1, d6sv1x2
Chain 'Y':
Compound: encapsulated ferritin
Species: Rhodospirillum rubrum [TaxId:1085]
Gene: Rru_A0973
Database cross-references and differences (RAF-indexed):
- Uniprot Q2RVS1 (Start-95)
  - engineered mutation (33)
Domains in SCOPe 2.08: d6sv1y_
Chain 'Z':
Compound: encapsulated ferritin
Species: Rhodospirillum rubrum [TaxId:1085]
Gene: Rru_A0973
Database cross-references and differences (RAF-indexed):
- Uniprot Q2RVS1 (Start-95)
  - engineered mutation (33)
  - expression tag (96)
Domains in SCOPe 2.08: d6sv1z1, d6sv1z2
Chain 'a':
Compound: encapsulated ferritin
Species: Rhodospirillum rubrum [TaxId:1085]
Gene: Rru_A0973
Database cross-references and differences (RAF-indexed):
- Uniprot Q2RVS1 (Start-95)
  - engineered mutation (33)
  - expression tag (96)
Chain 'b':
Compound: encapsulated ferritin
Species: Rhodospirillum rubrum [TaxId:1085]
Gene: Rru_A0973
Database cross-references and differences (RAF-indexed):
- Uniprot Q2RVS1 (Start-95)
  - engineered mutation (33)
Domains in SCOPe 2.08: d6sv1b_
Chain 'c':
Compound: encapsulated ferritin
Species: Rhodospirillum rubrum [TaxId:1085]
Gene: Rru_A0973
Database cross-references and differences (RAF-indexed):
- Uniprot Q2RVS1 (Start-95)
  - engineered mutation (33)
  - expression tag (96)
Chain 'd':
Compound: encapsulated ferritin
Species: Rhodospirillum rubrum [TaxId:1085]
Gene: Rru_A0973
Database cross-references and differences (RAF-indexed):
- Uniprot Q2RVS1 (Start-95)
  - engineered mutation (33)
Heterogens: CA, FE, HOH

PDB Chain Sequences:

Chain 'A':
Sequence, based on SEQRES records: (download)

>6sv1A (A:)
maqssnstheplevlkeetvnrhraivsvmeelaavdwydqrvdastdpeltailahnrd
eekehaamtlewlrrndakwaehlrtylftegpitaansssvdklaaalehhhhhh