PDB entry 6rya

View 6rya on RCSB PDB site
Description: Structure of Dup1 mutant H67A:Ubiquitin complex
Class: cell invasion
Keywords: Legionella pneumophila, deubiquitinase, Phosphoribose ubiquitination, TOXIN, CELL INVASION
Deposited on 2019-06-10, released 2019-11-13
The last revision prior to the SCOPe 2.07 freeze date was dated 2019-11-13, with a file datestamp of 2019-11-08.
Experiment type: XRAY
Resolution: 2.21 Å
R-factor: N/A
AEROSPACI score: 0.25 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Septation initiation protein
    Species: Legionella pneumophila subsp. pneumophila [TaxId:91891]
    Gene: D1H98_09620
    Database cross-references and differences (RAF-indexed):
    • Uniprot A0A3A6VNK6 (1-End)
      • expression tag (0)
      • conflict (64)
      • conflict (225)
  • Chain 'B':
    Compound: Polyubiquitin-C
    Species: Homo sapiens [TaxId:9606]
    Gene: UBC
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d6ryab_
  • Chain 'C':
    Compound: Septation initiation protein
    Species: Legionella pneumophila subsp. pneumophila [TaxId:91891]
    Gene: D1H98_09620
    Database cross-references and differences (RAF-indexed):
    • Uniprot A0A3A6VNK6 (1-End)
      • expression tag (0)
      • conflict (64)
      • conflict (225)
  • Chain 'D':
    Compound: Polyubiquitin-C
    Species: Homo sapiens [TaxId:9606]
    Gene: UBC
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d6ryad_
  • Chain 'E':
    Compound: Septation initiation protein
    Species: Legionella pneumophila subsp. pneumophila [TaxId:91891]
    Gene: D1H98_09620
    Database cross-references and differences (RAF-indexed):
    • Uniprot A0A3A6VNK6 (1-End)
      • expression tag (0)
      • conflict (64)
      • conflict (225)
  • Chain 'F':
    Compound: Polyubiquitin-C
    Species: Homo sapiens [TaxId:9606]
    Gene: UBC
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d6ryaf_

PDB Chain Sequences:

  • Chain 'A':
    No sequence available.

  • Chain 'B':
    Sequence; same for both SEQRES and ATOM records: (download)
    >6ryaB (B:)
    mqifvktltgktitlevepsdtienvkakiqdkegippdqqrlifagkqledgrtlsdyn
    iqkestlhlvlrlrgg
    

  • Chain 'C':
    No sequence available.

  • Chain 'D':
    Sequence; same for both SEQRES and ATOM records: (download)
    >6ryaD (D:)
    mqifvktltgktitlevepsdtienvkakiqdkegippdqqrlifagkqledgrtlsdyn
    iqkestlhlvlrlrgg
    

  • Chain 'E':
    No sequence available.

  • Chain 'F':
    Sequence; same for both SEQRES and ATOM records: (download)
    >6ryaF (F:)
    mqifvktltgktitlevepsdtienvkakiqdkegippdqqrlifagkqledgrtlsdyn
    iqkestlhlvlrlrgg