PDB entry 6rjm

View 6rjm on RCSB PDB site
Description: Complex structure of virulence factor SghA and its hydrolysis product glucose
Class: hydrolase
Keywords: Chemical signaling, Sucrose, Agrobacterium, Host-pathogen interaction, Glucosidase, HYDROLASE
Deposited on 2019-04-27, released 2019-10-09
The last revision prior to the SCOPe 2.08 freeze date was dated 2020-07-29, with a file datestamp of 2020-06-29.
Experiment type: XRAY
Resolution: 2.11 Å
R-factor: N/A
AEROSPACI score: 0.37 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Beta-glucosidase
    Species: Agrobacterium tumefaciens A6 [TaxId:1453998]
    Gene: sghA
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6rjma_
  • Chain 'B':
    Compound: Beta-glucosidase
    Species: Agrobacterium tumefaciens A6 [TaxId:1453998]
    Gene: sghA
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6rjmb_
  • Heterogens: GLC, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >6rjmA (A:)
mgsshhhhhhssglvprgshmlemdderaypmtdhkalaarfpgdflfgvatasfqiega
tkvdgrkpsiwdafcnmpghvfgrhngdvacdhynrweddldlikemgveayrfsiawpr
iipdgfgpinekgldfydrlvdgckargiktyatlyhwdlpltlmgdggwasrstahafq
ryaktvmarlgdrldavatfnepwcavwlshlygihapgernmeaalaamhhinlahgfg
veasrhvapkvpvglvlnahsvipasnsdadmkaaerafqfhngaffdpvfkgeypaemi
ealgsrmpvveaedlsiisqkldwwglnyytpmrvaddategaefpatkqapavsdvktd
igwevyapalhslvetlyeryelpdcyitengacynmgvengevddqprldyyaehlgiv
adlvkdgypmrgyfawslmdnfewaegyrmrfglvhvdyetqvrtlknsgkwysalasgf
pkgnhgvmkg

    Sequence, based on observed residues (ATOM records): (download) 
    >6rjmA (A:)
ypmtdhkalaarfpgdflfgvatasfqiegatkvdgrkpsiwdafcnmpghvfgrhngdv
acdhynrweddldlikemgveayrfsiawpriipdgfgpinekgldfydrlvdgckargi
ktyatlyhwdlpltlmgdggwasrstahafqryaktvmarlgdrldavatfnepwcavwl
shlygihapgernmeaalaamhhinlahgfgveasrhvapkvpvglvlnahsvipasnsd
admkaaerafqfhngaffdpvfkgeypaemiealgsrmpvveaedlsiisqkldwwglny
ytpmrvaddategaefpatkqapavsdvktdigwevyapalhslvetlyeryelpdcyit
engacynmgvengevddqprldyyaehlgivadlvkdgypmrgyfawslmdnfewaegyr
mrfglvhvdyetqvrtlknsgkwysalasgfpk

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >6rjmB (B:)
mgsshhhhhhssglvprgshmlemdderaypmtdhkalaarfpgdflfgvatasfqiega
tkvdgrkpsiwdafcnmpghvfgrhngdvacdhynrweddldlikemgveayrfsiawpr
iipdgfgpinekgldfydrlvdgckargiktyatlyhwdlpltlmgdggwasrstahafq
ryaktvmarlgdrldavatfnepwcavwlshlygihapgernmeaalaamhhinlahgfg
veasrhvapkvpvglvlnahsvipasnsdadmkaaerafqfhngaffdpvfkgeypaemi
ealgsrmpvveaedlsiisqkldwwglnyytpmrvaddategaefpatkqapavsdvktd
igwevyapalhslvetlyeryelpdcyitengacynmgvengevddqprldyyaehlgiv
adlvkdgypmrgyfawslmdnfewaegyrmrfglvhvdyetqvrtlknsgkwysalasgf
pkgnhgvmkg

    Sequence, based on observed residues (ATOM records): (download) 
    >6rjmB (B:)
tdhkalaarfpgdflfgvatasfqiegatkvdgrkpsiwdafcnmpghvfgrhngdvacd
hynrweddldlikemgveayrfsiawpriipdgfgpinekgldfydrlvdgckargikty
atlyhwdlpltlmgdggwasrstahafqryaktvmarlgdrldavatfnepwcavwlshl
ygihapgernmeaalaamhhinlahgfgveasrhvapkvpvglvlnahsvipasnsdadm
kaaerafqfhngaffdpvfkgeypaemiealgsrmpvveaedlsiisqkldwwglnyytp
mrvaddategaefpatkqapavsdvktdigwevyapalhslvetlyeryelpdcyiteng
acynmgvengevddqprldyyaehlgivadlvkdgypmrgyfawslmdnfewaegyrmrf
glvhvdyetqvrtlknsgkwysalasgfpkgnhgvm