PDB entry 6qp1

View 6qp1 on RCSB PDB site
Description: Crystal structure of the PLP-bound C-S lyase in the external aldimine form from Staphylococcus hominis complexed with an inhibitor, L-cycloserine.
Class: lyase
Keywords: pyridoxal phosphate binding, cystathionine beta-lyase, LYASE, inhibitor, complex, L-cycloserine, external aldimine
Deposited on 2019-02-13, released 2020-03-04
The last revision prior to the SCOPe 2.08 freeze date was dated 2020-08-05, with a file datestamp of 2020-07-31.
Experiment type: XRAY
Resolution: 1.42 Å
R-factor: N/A
AEROSPACI score: 0.6 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: aminotransferase
    Species: Staphylococcus hominis [TaxId:1290]
    Gene: BUZ46_10400
    Database cross-references and differences (RAF-indexed):
    • PDB 6QP1
    Domains in SCOPe 2.08: d6qp1a1, d6qp1a2
  • Chain 'B':
    Compound: aminotransferase
    Species: Staphylococcus hominis [TaxId:1290]
    Gene: BUZ46_10400
    Database cross-references and differences (RAF-indexed):
    • PDB 6QP1
    Domains in SCOPe 2.08: d6qp1b1, d6qp1b2
  • Heterogens: LCS, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download)
    >6qp1A (A:)
    mgggfavnynfdeiidrrytnamnvegykgylfgdadtsdlkdndelirmwvadmdfgtp
    evvlnairerlnkkilgytnvfgseyyeafvswtkkrygftfsqehlvfshgivagliel
    vgyicdkddkalivtpsygpfkmacdknhistvysplinhhgyyeidfddvrkkveteni
    klcifanphnptgrvwseeelatlgqimkendvwlisdeihcdikrsgqshipfakavpd
    ydkiittmsqskafniaglmfsniiiqnesllktwnthhfgtenplsvvatqaayekgeg
    wlqamnhylddnfnyladflekelphaefkipeatylawvdlsyyikekdidesmakffi
    knagviiegaeqfvhnaeghiriniavprevmkkglqkikaalvenlyfqghhhhhhhhh
    h
    

    Sequence, based on observed residues (ATOM records): (download)
    >6qp1A (A:)
    ynfdeiidrrytnamnvegykgyllirmwvadmdfgtpevvlnairerlnkkilgytnvf
    gseyyeafvswtkkrygftfsqehlvfshgivaglielvgyicdkddkalivtpsygpfk
    macdknhistvysplinhhgyyeidfddvrkkveteniklcifanphnptgrvwseeela
    tlgqimkendvwlisdeihcdikrsgqshipfakavpdydkiittmsqskafniaglmfs
    niiiqnesllktwnthhfgtenplsvvatqaayekgegwlqamnhylddnfnyladflek
    elphaefkipeatylawvdlsyyikekdidesmakffiknagviiegaeqfvhnaeghir
    iniavprevmkkglqkikaalvenly
    

  • Chain 'B':
    Sequence, based on SEQRES records: (download)
    >6qp1B (B:)
    mgggfavnynfdeiidrrytnamnvegykgylfgdadtsdlkdndelirmwvadmdfgtp
    evvlnairerlnkkilgytnvfgseyyeafvswtkkrygftfsqehlvfshgivagliel
    vgyicdkddkalivtpsygpfkmacdknhistvysplinhhgyyeidfddvrkkveteni
    klcifanphnptgrvwseeelatlgqimkendvwlisdeihcdikrsgqshipfakavpd
    ydkiittmsqskafniaglmfsniiiqnesllktwnthhfgtenplsvvatqaayekgeg
    wlqamnhylddnfnyladflekelphaefkipeatylawvdlsyyikekdidesmakffi
    knagviiegaeqfvhnaeghiriniavprevmkkglqkikaalvenlyfqghhhhhhhhh
    h
    

    Sequence, based on observed residues (ATOM records): (download)
    >6qp1B (B:)
    gggfavnynfdeiidrrytnamnvegykgylfgdadtsdlkdndelirmwvadmdfgtpe
    vvlnairerlnkkilgytnvfgseyyeafvswtkkrygftfsqehlvfshgivaglielv
    gyicdkddkalivtpsygpfkmacdknhistvysplinhhgyyeidfddvrkkvetenik
    lcifanphnptgrvwseeelatlgqimkendvwlisdeihcdikrsgqshipfakavpdy
    dkiittmsqskafniaglmfsniiiqnesllktwnthhfgtenplsvvatqaayekgegw
    lqamnhylddnfnyladflekelphaefkipeatylawvdlsyyikesmakffiknagvi
    iegaeqfvhnaeghiriniavprevmkkglqkikaalv