PDB entry 6q60
View 6q60 on RCSB PDB site
Description: Structure of GluA2 ligand-binding domain (S1S2J) in complex with the agonist (S)-2-Amino-3-(2-methyl-5-hydroxy-2H-1,2,3-triazol-4-yl)propanoic acid at 1.55 A resolution
Class: membrane protein
Keywords: AMPA receptor, GluA2-S1S2, ligand binding domain, agonist, membrane protein
Deposited on
2018-12-10, released
2019-04-17
The last revision prior to the SCOPe 2.08 freeze date was dated
2019-05-22, with a file datestamp of
2019-05-17.
Experiment type: XRAY
Resolution: 1.55 Å
R-factor: N/A
AEROSPACI score: 0.46
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: Glutamate receptor 2
Species: Rattus norvegicus [TaxId:10116]
Gene: Gria2, Glur2
Database cross-references and differences (RAF-indexed):
- Uniprot P19491 (2-116)
- cloning artifact (0-1)
- linker (117-118)
- Uniprot P19491 (119-263)
Domains in SCOPe 2.08: d6q60a1, d6q60a2 - Chain 'B':
Compound: Glutamate receptor 2
Species: Rattus norvegicus [TaxId:10116]
Gene: Gria2, Glur2
Database cross-references and differences (RAF-indexed):
- Uniprot P19491 (2-116)
- cloning artifact (0-1)
- linker (117-118)
- Uniprot P19491 (119-End)
Domains in SCOPe 2.08: d6q60b1, d6q60b2 - Heterogens: HJH, SO4, GOL, CL, LI, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence; same for both SEQRES and ATOM records: (download)
>6q60A (A:)
ganktvvvttilespyvmmkknhemlegneryegycvdlaaeiakhcgfkykltivgdgk
ygardadtkiwngmvgelvygkadiaiapltitlvreevidfskpfmslgisimikkgtp
iesaedlskqteiaygtldsgstkeffrrskiavfdkmwtymrsaepsvfvrttaegvar
vrkskgkyayllestmneyieqrkpcdtmkvggnldskgygiatpkgsslgnavnlavlk
lneqglldklknkwwydkgecgsg
- Chain 'B':
Sequence, based on SEQRES records: (download)
>6q60B (B:)
ganktvvvttilespyvmmkknhemlegneryegycvdlaaeiakhcgfkykltivgdgk
ygardadtkiwngmvgelvygkadiaiapltitlvreevidfskpfmslgisimikkgtp
iesaedlskqteiaygtldsgstkeffrrskiavfdkmwtymrsaepsvfvrttaegvar
vrkskgkyayllestmneyieqrkpcdtmkvggnldskgygiatpkgsslgnavnlavlk
lneqglldklknkwwydkgecgsg
Sequence, based on observed residues (ATOM records): (download)
>6q60B (B:)
ganktvvvttilespyvmmkknhemlegneryegycvdlaaeiakhcgfkykltivgdgk
ygardadtkiwngmvgelvygkadiaiapltitlvreevidfskpfmslgisimikkgtp
iesaedlskqteiaygtldsgstkeffrrskiavfdkmwtymrsaepsvfvrttaegvar
vrkskgkyayllestmneyieqrkpcdtmkvggnldskgygiatpkgsslgnavnlavlk
lneqglldklknkwwydkgecgs