PDB entry 6p8l

View 6p8l on RCSB PDB site
Description: Escherichia coli Bacterioferritin Substituted with Zinc Protoporphyrin IX (Zn Absorption Edge X-ray Data)
Class: metal binding protein, oxidoreductase
Keywords: bacterioferritin, zinc protoporphyrin IX, photosensitizer, ferritin, metal binding protein, oxidoreductase
Deposited on 2019-06-07, released 2020-05-13
The last revision prior to the SCOPe 2.08 freeze date was dated 2020-05-13, with a file datestamp of 2020-05-08.
Experiment type: XRAY
Resolution: 2.1 Å
R-factor: N/A
AEROSPACI score: 0.3 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: bacterioferritin
    Species: Escherichia coli K-12 [TaxId:83333]
    Gene: bfr, b3336, JW3298
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6p8la_
  • Chain 'B':
    Compound: bacterioferritin
    Species: Escherichia coli K-12 [TaxId:83333]
    Gene: bfr, b3336, JW3298
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6p8lb_
  • Chain 'C':
    Compound: bacterioferritin
    Species: Escherichia coli K-12 [TaxId:83333]
    Gene: bfr, b3336, JW3298
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6p8lc_
  • Chain 'D':
    Compound: bacterioferritin
    Species: Escherichia coli K-12 [TaxId:83333]
    Gene: bfr, b3336, JW3298
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6p8ld_
  • Chain 'E':
    Compound: bacterioferritin
    Species: Escherichia coli K-12 [TaxId:83333]
    Gene: bfr, b3336, JW3298
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6p8le_
  • Chain 'F':
    Compound: bacterioferritin
    Species: Escherichia coli K-12 [TaxId:83333]
    Gene: bfr, b3336, JW3298
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6p8lf_
  • Chain 'G':
    Compound: bacterioferritin
    Species: Escherichia coli K-12 [TaxId:83333]
    Gene: bfr, b3336, JW3298
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6p8lg_
  • Chain 'H':
    Compound: bacterioferritin
    Species: Escherichia coli K-12 [TaxId:83333]
    Gene: bfr, b3336, JW3298
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6p8lh_
  • Chain 'I':
    Compound: bacterioferritin
    Species: Escherichia coli K-12 [TaxId:83333]
    Gene: bfr, b3336, JW3298
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6p8li_
  • Chain 'J':
    Compound: bacterioferritin
    Species: Escherichia coli K-12 [TaxId:83333]
    Gene: bfr, b3336, JW3298
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6p8lj_
  • Chain 'K':
    Compound: bacterioferritin
    Species: Escherichia coli K-12 [TaxId:83333]
    Gene: bfr, b3336, JW3298
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6p8lk_
  • Chain 'L':
    Compound: bacterioferritin
    Species: Escherichia coli K-12 [TaxId:83333]
    Gene: bfr, b3336, JW3298
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6p8ll_
  • Heterogens: ZNH, ZN, NA, MLI, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download)
    >6p8lA (A:)
    mkgdtkvinylnkllgnelvainqyflharmfknwglkrlndveyhesidemkhadryie
    rilfleglpnlqdlgklnigedveemlrsdlaleldgaknlreaigyadsvhdyvsrdmm
    ieilrdeeghidwleteldliqkmglqnylqaqireeg
    

    Sequence, based on observed residues (ATOM records): (download)
    >6p8lA (A:)
    mkgdtkvinylnkllgnelvainqyflharmfknwglkrlndveyhesidemkhadryie
    rilfleglpnlqdlgklnigedveemlrsdlaleldgaknlreaigyadsvhdyvsrdmm
    ieilrdeeghidwleteldliqkmglqnylqaqiree
    

  • Chain 'B':
    Sequence, based on SEQRES records: (download)
    >6p8lB (B:)
    mkgdtkvinylnkllgnelvainqyflharmfknwglkrlndveyhesidemkhadryie
    rilfleglpnlqdlgklnigedveemlrsdlaleldgaknlreaigyadsvhdyvsrdmm
    ieilrdeeghidwleteldliqkmglqnylqaqireeg
    

    Sequence, based on observed residues (ATOM records): (download)
    >6p8lB (B:)
    mkgdtkvinylnkllgnelvainqyflharmfknwglkrlndveyhesidemkhadryie
    rilfleglpnlqdlgklnigedveemlrsdlaleldgaknlreaigyadsvhdyvsrdmm
    ieilrdeeghidwleteldliqkmglqnylqaqiree
    

  • Chain 'C':
    Sequence, based on SEQRES records: (download)
    >6p8lC (C:)
    mkgdtkvinylnkllgnelvainqyflharmfknwglkrlndveyhesidemkhadryie
    rilfleglpnlqdlgklnigedveemlrsdlaleldgaknlreaigyadsvhdyvsrdmm
    ieilrdeeghidwleteldliqkmglqnylqaqireeg
    

    Sequence, based on observed residues (ATOM records): (download)
    >6p8lC (C:)
    mkgdtkvinylnkllgnelvainqyflharmfknwglkrlndveyhesidemkhadryie
    rilfleglpnlqdlgklnigedveemlrsdlaleldgaknlreaigyadsvhdyvsrdmm
    ieilrdeeghidwleteldliqkmglqnylqaqiree
    

  • Chain 'D':
    Sequence, based on SEQRES records: (download)
    >6p8lD (D:)
    mkgdtkvinylnkllgnelvainqyflharmfknwglkrlndveyhesidemkhadryie
    rilfleglpnlqdlgklnigedveemlrsdlaleldgaknlreaigyadsvhdyvsrdmm
    ieilrdeeghidwleteldliqkmglqnylqaqireeg
    

    Sequence, based on observed residues (ATOM records): (download)
    >6p8lD (D:)
    mkgdtkvinylnkllgnelvainqyflharmfknwglkrlndveyhesidemkhadryie
    rilfleglpnlqdlgklnigedveemlrsdlaleldgaknlreaigyadsvhdyvsrdmm
    ieilrdeeghidwleteldliqkmglqnylqaqiree
    

  • Chain 'E':
    Sequence, based on SEQRES records: (download)
    >6p8lE (E:)
    mkgdtkvinylnkllgnelvainqyflharmfknwglkrlndveyhesidemkhadryie
    rilfleglpnlqdlgklnigedveemlrsdlaleldgaknlreaigyadsvhdyvsrdmm
    ieilrdeeghidwleteldliqkmglqnylqaqireeg
    

    Sequence, based on observed residues (ATOM records): (download)
    >6p8lE (E:)
    mkgdtkvinylnkllgnelvainqyflharmfknwglkrlndveyhesidemkhadryie
    rilfleglpnlqdlgklnigedveemlrsdlaleldgaknlreaigyadsvhdyvsrdmm
    ieilrdeeghidwleteldliqkmglqnylqaqiree
    

  • Chain 'F':
    Sequence, based on SEQRES records: (download)
    >6p8lF (F:)
    mkgdtkvinylnkllgnelvainqyflharmfknwglkrlndveyhesidemkhadryie
    rilfleglpnlqdlgklnigedveemlrsdlaleldgaknlreaigyadsvhdyvsrdmm
    ieilrdeeghidwleteldliqkmglqnylqaqireeg
    

    Sequence, based on observed residues (ATOM records): (download)
    >6p8lF (F:)
    mkgdtkvinylnkllgnelvainqyflharmfknwglkrlndveyhesidemkhadryie
    rilfleglpnlqdlgklnigedveemlrsdlaleldgaknlreaigyadsvhdyvsrdmm
    ieilrdeeghidwleteldliqkmglqnylqaqiree
    

  • Chain 'G':
    Sequence, based on SEQRES records: (download)
    >6p8lG (G:)
    mkgdtkvinylnkllgnelvainqyflharmfknwglkrlndveyhesidemkhadryie
    rilfleglpnlqdlgklnigedveemlrsdlaleldgaknlreaigyadsvhdyvsrdmm
    ieilrdeeghidwleteldliqkmglqnylqaqireeg
    

    Sequence, based on observed residues (ATOM records): (download)
    >6p8lG (G:)
    mkgdtkvinylnkllgnelvainqyflharmfknwglkrlndveyhesidemkhadryie
    rilfleglpnlqdlgklnigedveemlrsdlaleldgaknlreaigyadsvhdyvsrdmm
    ieilrdeeghidwleteldliqkmglqnylqaqiree
    

  • Chain 'H':
    Sequence, based on SEQRES records: (download)
    >6p8lH (H:)
    mkgdtkvinylnkllgnelvainqyflharmfknwglkrlndveyhesidemkhadryie
    rilfleglpnlqdlgklnigedveemlrsdlaleldgaknlreaigyadsvhdyvsrdmm
    ieilrdeeghidwleteldliqkmglqnylqaqireeg
    

    Sequence, based on observed residues (ATOM records): (download)
    >6p8lH (H:)
    mkgdtkvinylnkllgnelvainqyflharmfknwglkrlndveyhesidemkhadryie
    rilfleglpnlqdlgklnigedveemlrsdlaleldgaknlreaigyadsvhdyvsrdmm
    ieilrdeeghidwleteldliqkmglqnylqaqiree
    

  • Chain 'I':
    Sequence, based on SEQRES records: (download)
    >6p8lI (I:)
    mkgdtkvinylnkllgnelvainqyflharmfknwglkrlndveyhesidemkhadryie
    rilfleglpnlqdlgklnigedveemlrsdlaleldgaknlreaigyadsvhdyvsrdmm
    ieilrdeeghidwleteldliqkmglqnylqaqireeg
    

    Sequence, based on observed residues (ATOM records): (download)
    >6p8lI (I:)
    mkgdtkvinylnkllgnelvainqyflharmfknwglkrlndveyhesidemkhadryie
    rilfleglpnlqdlgklnigedveemlrsdlaleldgaknlreaigyadsvhdyvsrdmm
    ieilrdeeghidwleteldliqkmglqnylqaqiree
    

  • Chain 'J':
    Sequence, based on SEQRES records: (download)
    >6p8lJ (J:)
    mkgdtkvinylnkllgnelvainqyflharmfknwglkrlndveyhesidemkhadryie
    rilfleglpnlqdlgklnigedveemlrsdlaleldgaknlreaigyadsvhdyvsrdmm
    ieilrdeeghidwleteldliqkmglqnylqaqireeg
    

    Sequence, based on observed residues (ATOM records): (download)
    >6p8lJ (J:)
    mkgdtkvinylnkllgnelvainqyflharmfknwglkrlndveyhesidemkhadryie
    rilfleglpnlqdlgklnigedveemlrsdlaleldgaknlreaigyadsvhdyvsrdmm
    ieilrdeeghidwleteldliqkmglqnylqaqiree
    

  • Chain 'K':
    Sequence, based on SEQRES records: (download)
    >6p8lK (K:)
    mkgdtkvinylnkllgnelvainqyflharmfknwglkrlndveyhesidemkhadryie
    rilfleglpnlqdlgklnigedveemlrsdlaleldgaknlreaigyadsvhdyvsrdmm
    ieilrdeeghidwleteldliqkmglqnylqaqireeg
    

    Sequence, based on observed residues (ATOM records): (download)
    >6p8lK (K:)
    mkgdtkvinylnkllgnelvainqyflharmfknwglkrlndveyhesidemkhadryie
    rilfleglpnlqdlgklnigedveemlrsdlaleldgaknlreaigyadsvhdyvsrdmm
    ieilrdeeghidwleteldliqkmglqnylqaqiree
    

  • Chain 'L':
    Sequence, based on SEQRES records: (download)
    >6p8lL (L:)
    mkgdtkvinylnkllgnelvainqyflharmfknwglkrlndveyhesidemkhadryie
    rilfleglpnlqdlgklnigedveemlrsdlaleldgaknlreaigyadsvhdyvsrdmm
    ieilrdeeghidwleteldliqkmglqnylqaqireeg
    

    Sequence, based on observed residues (ATOM records): (download)
    >6p8lL (L:)
    mkgdtkvinylnkllgnelvainqyflharmfknwglkrlndveyhesidemkhadryie
    rilfleglpnlqdlgklnigedveemlrsdlaleldgaknlreaigyadsvhdyvsrdmm
    ieilrdeeghidwleteldliqkmglqnylqaqiree