SCOPe 2.08: Structural Classification of Proteins

PDB entry 6p6u

View 6p6u on RCSB PDB site
Description: Crystal Structure of Monoclinic Rabbit Muscle Lactate Dehydrogenase with Four Tetramers as the Asymmetric Unit
Class: oxidoreductase
Keywords: enzyme, AMP, NCS, isozyme, myosin, OXIDOREDUCTASE
Deposited on 2019-06-04, released 2020-06-17
The last revision prior to the SCOPe 2.08 freeze date was dated 2020-06-17, with a file datestamp of 2020-06-12.
Experiment type: XRAY
Resolution: 2.42 Å
R-factor: N/A
AEROSPACI score: 0.22 (click here for full SPACI score report)

Chains and heterogens:

Chain 'A':
Compound: L-lactate dehydrogenase A chain
Species: Oryctolagus cuniculus [TaxId:9986]
Gene: LDHA
Database cross-references and differences (RAF-indexed):
- Uniprot P13491 (Start-331)
Domains in SCOPe 2.08: d6p6ua1, d6p6ua2
Chain 'B':
Compound: L-lactate dehydrogenase A chain
Species: Oryctolagus cuniculus [TaxId:9986]
Gene: LDHA
Database cross-references and differences (RAF-indexed):
- Uniprot P13491 (Start-331)
Domains in SCOPe 2.08: d6p6ub1, d6p6ub2
Chain 'C':
Compound: L-lactate dehydrogenase A chain
Species: Oryctolagus cuniculus [TaxId:9986]
Gene: LDHA
Database cross-references and differences (RAF-indexed):
- Uniprot P13491 (Start-331)
Domains in SCOPe 2.08: d6p6uc1, d6p6uc2
Chain 'D':
Compound: L-lactate dehydrogenase A chain
Species: Oryctolagus cuniculus [TaxId:9986]
Gene: LDHA
Database cross-references and differences (RAF-indexed):
- Uniprot P13491 (Start-331)
Domains in SCOPe 2.08: d6p6ud1, d6p6ud2
Chain 'E':
Compound: L-lactate dehydrogenase A chain
Species: Oryctolagus cuniculus [TaxId:9986]
Gene: LDHA
Database cross-references and differences (RAF-indexed):
- Uniprot P13491 (Start-331)
Domains in SCOPe 2.08: d6p6ue1, d6p6ue2
Chain 'F':
Compound: L-lactate dehydrogenase A chain
Species: Oryctolagus cuniculus [TaxId:9986]
Gene: LDHA
Database cross-references and differences (RAF-indexed):
- Uniprot P13491 (Start-331)
Domains in SCOPe 2.08: d6p6uf1, d6p6uf2
Chain 'G':
Compound: L-lactate dehydrogenase A chain
Species: Oryctolagus cuniculus [TaxId:9986]
Gene: LDHA
Database cross-references and differences (RAF-indexed):
- Uniprot P13491 (Start-331)
Domains in SCOPe 2.08: d6p6ug1, d6p6ug2
Chain 'H':
Compound: L-lactate dehydrogenase A chain
Species: Oryctolagus cuniculus [TaxId:9986]
Gene: LDHA
Database cross-references and differences (RAF-indexed):
- Uniprot P13491 (Start-331)
Domains in SCOPe 2.08: d6p6uh1, d6p6uh2
Chain 'I':
Compound: L-lactate dehydrogenase A chain
Species: Oryctolagus cuniculus [TaxId:9986]
Gene: LDHA
Database cross-references and differences (RAF-indexed):
- Uniprot P13491 (Start-331)
Domains in SCOPe 2.08: d6p6ui1, d6p6ui2
Chain 'J':
Compound: L-lactate dehydrogenase A chain
Species: Oryctolagus cuniculus [TaxId:9986]
Gene: LDHA
Database cross-references and differences (RAF-indexed):
- Uniprot P13491 (Start-331)
Domains in SCOPe 2.08: d6p6uj1, d6p6uj2
Chain 'K':
Compound: L-lactate dehydrogenase A chain
Species: Oryctolagus cuniculus [TaxId:9986]
Gene: LDHA
Database cross-references and differences (RAF-indexed):
- Uniprot P13491 (Start-331)
Domains in SCOPe 2.08: d6p6uk1, d6p6uk2
Chain 'L':
Compound: L-lactate dehydrogenase A chain
Species: Oryctolagus cuniculus [TaxId:9986]
Gene: LDHA
Database cross-references and differences (RAF-indexed):
- Uniprot P13491 (Start-331)
Domains in SCOPe 2.08: d6p6ul1, d6p6ul2
Chain 'M':
Compound: L-lactate dehydrogenase A chain
Species: Oryctolagus cuniculus [TaxId:9986]
Gene: LDHA
Database cross-references and differences (RAF-indexed):
- Uniprot P13491 (Start-331)
Domains in SCOPe 2.08: d6p6um1, d6p6um2
Chain 'N':
Compound: L-lactate dehydrogenase A chain
Species: Oryctolagus cuniculus [TaxId:9986]
Gene: LDHA
Database cross-references and differences (RAF-indexed):
- Uniprot P13491 (Start-331)
Domains in SCOPe 2.08: d6p6un1, d6p6un2
Chain 'O':
Compound: L-lactate dehydrogenase A chain
Species: Oryctolagus cuniculus [TaxId:9986]
Gene: LDHA
Database cross-references and differences (RAF-indexed):
- Uniprot P13491 (Start-331)
Domains in SCOPe 2.08: d6p6uo1, d6p6uo2
Chain 'P':
Compound: L-lactate dehydrogenase A chain
Species: Oryctolagus cuniculus [TaxId:9986]
Gene: LDHA
Database cross-references and differences (RAF-indexed):
- Uniprot P13491 (Start-331)
Domains in SCOPe 2.08: d6p6up1, d6p6up2
Heterogens: AMP, HOH

PDB Chain Sequences:

Chain 'A':
Sequence, based on SEQRES records: (download)

>6p6uA (A:)
maalkdqlihnllkeehvpqnkitvvgvgavgmacaisilmkdladelalvdvmedklkg
emmdlqhgslflrtpkivsgkdysvtansklviitagarqqegesrlnlvqrnvnifkfi
ipnvvkysphckllvvsnpvdiltyvawkisgfpknrvigsgcnldsarfrylmgerlgv
halschgwilgehgdssvpvwsgmnvagvslktlhpelgtdadkeqwkqvhkqvvdsaye
viklkgyttwaiglsvadlaesimknlrrvhpistmlkglygikedvflsvpcvlgqngi
sdvvkvtltseeeahlkksadtlwgiqkelqf