PDB entry 6o60

View 6o60 on RCSB PDB site
Description: Crystal structure of GGTase3-FBXL2-SKP1 complex
Class: transferase
Keywords: F-box, Leucine-rich repeat, GGTase subunits, TRANSFERASE
Deposited on 2019-03-04, released 2019-06-26
The last revision prior to the SCOPe 2.07 freeze date was dated 2019-06-26, with a file datestamp of 2019-06-21.
Experiment type: XRAY
Resolution: 2.5 Å
R-factor: N/A
AEROSPACI score: 0.2 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Protein prenyltransferase alpha subunit repeat-containing protein 1
    Species: Homo sapiens [TaxId:9606]
    Gene: PTAR1
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: Geranylgeranyl transferase type-2 subunit beta
    Species: Homo sapiens [TaxId:9606]
    Gene: Rabggtb, Ggtb
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d6o60b_
  • Chain 'C':
    Compound: F-box/LRR-repeat protein 2
    Species: Homo sapiens [TaxId:9606]
    Gene: FBXL2, FBL2, FBL3
    Database cross-references and differences (RAF-indexed):
  • Chain 'D':
    Compound: S-phase kinase-associated protein 1
    Species: Homo sapiens [TaxId:9606]
    Gene: SKP1, EMC19, OCP2, SKP1A, TCEB1L
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d6o60d1, d6o60d2
  • Heterogens: ZN, HOH

PDB Chain Sequences:

  • Chain 'A':
    No sequence available.

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >6o60B (B:)
smgtpqkdviiksdapdtlllekhadyiasygskkddyeycmseylrmsgiywgltvmdl
mgqlhrmnreeilafikscqhecggisasighdphllytlsavqiltlydsinvidvnkv
veyvkglqkedgsfagdiwgeidtrfsfcavatlallgkldainvekaiefvlscmnfdg
gfgcrpgseshagqiycctgflaitsqlhqvnsdllgwwlcerqlpsgglngrpeklpdv
cyswwvlaslkiigrlhwidreklrnfilacqdeetggfadrpgdmvdpfhtlfgiagls
llgeeqikpvnpvfcmpeevlqrvnvqpelvs

    Sequence, based on observed residues (ATOM records): (download) 
    >6o60B (B:)
kdviiksdapdtlllekhadyiasygddyeycmseylrmsgiywgltvmdlmgqlhrmnr
eeilafikscqhecggisasighdphllytlsavqiltlydsinvidvnkvveyvkglqk
edgsfagdiwgeidtrfsfcavatlallgkldainvekaiefvlscmnfdggfgcrpgse
shagqiycctgflaitsqlhqvnsdllgwwlcerqlpsgglngrpeklpdvcyswwvlas
lkiigrlhwidreklrnfilacqdeetggfadrpgdmvdpfhtlfgiaglsllgeeqikp
vnpvfcmpeevlqrvnvqpe

  • Chain 'C':
    No sequence available.

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >6o60D (D:)
smpsiklqssdgeifevdveiakqsvtiktmledlgmddegdddpvplpnvnaailkkvi
qwcthhkddppppeddenkekrtddipvwdqeflkvdqgtlfelilaanyldikglldvt
cktvanmikgktpeeirktfnikndfteeeeaqvrkenqwceek

    Sequence, based on observed residues (ATOM records): (download) 
    >6o60D (D:)
psiklqssdgeifevdveiakqsvtiktmledlgmddegdddpvplpnvnaailkkviqw
cthhkdekrtddipvwdqeflkvdqgtlfelilaanyldikglldvtcktvanmikgktp
eeirktfnikndfteeeeaqvrkenqwc