PDB entry 6nsa

View 6nsa on RCSB PDB site
Description: Crystal structure of the IVR-165 (H3N2) influenza virus hemagglutinin in complex with 3'-SLNLN
Class: viral protein
Keywords: viral protein
Deposited on 2019-01-24, released 2019-04-24
The last revision prior to the SCOPe 2.08 freeze date was dated 2020-07-29, with a file datestamp of 2020-07-04.
Experiment type: XRAY
Resolution: 1.95 Å
R-factor: N/A
AEROSPACI score: 0.41 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Hemagglutinin HA1 chain
    Species: Influenza A virus [TaxId:1268360]
    Gene: HA
    Database cross-references and differences (RAF-indexed):
    • Uniprot L0HR89 (2-End)
      • expression tag (0-1)
    Domains in SCOPe 2.08: d6nsaa1, d6nsaa2
  • Chain 'B':
    Compound: Hemagglutinin HA2 chain
    Species: Influenza A virus [TaxId:1268360]
    Gene: HA
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6nsab_
  • Heterogens: NAG, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download)
    >6nsaA (A:)
    pgatlclghhavpngtivktitndqievtnatelvqnssigeicdsphqildgenctlid
    allgdpqcdgfqnkkwdlfverskaysncypydvpdyaslrslvassgtlefnnesfnwt
    gvtqngtssacirrsnnsffsrlnwltqlnfkypalnvtmpnneqfdklyiwgvhhpvtd
    kdqiflyaqssgritvstkrsqqavipnigyrprirnipsrisiywtivkpgdillinst
    gnliaprgyfkirsgkssimrsdapigkcnsecitpngsipndkpfqnvnritygacpry
    vkqstlklatgmrnvpekqtr
    

    Sequence, based on observed residues (ATOM records): (download)
    >6nsaA (A:)
    pgatlclghhavpngtivktitndqievtnatelvqnssigeicdsphqildgenctlid
    allgdpqcdgfqnkkwdlfverskaysncypydvpdyaslrslvassgtlefnnesfnwt
    gvtqngtssacirrsnnsffsrlnwltqlnfkypalnvtmpnneqfdklyiwgvhhpvtd
    kdqiflyaqssgritvstkrsqqavipnigyrprirnipsrisiywtivkpgdillinst
    gnliaprgyfkirsgkssimrsdapigkcnsecitpngsipndkpfqnvnritygacpry
    vkqstlklatgmrnvpe
    

  • Chain 'B':
    Sequence, based on SEQRES records: (download)
    >6nsaB (B:)
    gifgaiagfiengwegmvdgwygfrhqnsegrgqaadlkstqaaidqingklnrligktn
    ekfhqiekefsevegriqdlekyvedtkidlwsynaellvalenqhtidltdsemnklfe
    ktkkqlrenaedmgngcfkiyhkcdnacigsirngtydhdvyrdealnnrfqikgv
    

    Sequence, based on observed residues (ATOM records): (download)
    >6nsaB (B:)
    aiagfiengwegmvdgwygfrhqnsegrgqaadlkstqaaidqingklnrligktnekfh
    qiekefsevegriqdlekyvedtkidlwsynaellvalenqhtidltdsemnklfektkk
    qlrenaedmgngcfkiyhkcdnacigsirngtydhdvyrdealnnrfqi