PDB entry 6mnm
View 6mnm on RCSB PDB site
Description: 6256 TCR bound to I-Ab Padi4
Class: immune system
Keywords: T cell receptor, Major Histocompatibility Complex, IMMUNE SYSTEM
Deposited on
2018-10-02, released
2019-07-03
The last revision prior to the SCOPe 2.07 freeze date was dated
2019-07-03, with a file datestamp of
2019-06-28.
Experiment type: XRAY
Resolution: 3.1 Å
R-factor: N/A
AEROSPACI score: 0.12
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: 6256 TCR alpha chain
Species: Mus musculus [TaxId:10090]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.07: d6mnma1, d6mnma2 - Chain 'B':
Compound: 6256 TCR beta chain
Species: Mus musculus [TaxId:10090]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.07: d6mnmb1, d6mnmb2 - Chain 'C':
Compound: H-2 class II histocompatibility antigen, A-B alpha chain
Species: Mus musculus [TaxId:10090]
Gene: H2-Aa
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.07: d6mnmc1, d6mnmc2, d6mnmc3 - Chain 'D':
Compound: Padi4 (92-105) peptide and MHC Class II I-Ab beta chain
Species: Mus musculus [TaxId:10090]
Gene: H2-Ab1, H2-iabeta
Database cross-references and differences (RAF-indexed):
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>6mnmA (A:)
mqqvrqspqsltvwegetailncsyensafdyfpwyqqfpgegpalliairsvsdkkedg
rftiffnkrekklslhitdsqpgdsatyfcaasatgantgkltfghgtilrvhpniqnpd
pavyqlrdskssdksvclftdfdsqtnvsqskdsdvyitdkcvldmrsmdfksnsavaws
nksdfacanafnnsiipedtffpspess
Sequence, based on observed residues (ATOM records): (download)
>6mnmA (A:)
qvrqspqsltvwegetailncsyensafdyfpwyqqfpgegpalliairsvsdkkedgrf
tiffnkrekklslhitdsqpgdsatyfcaasatgantgkltfghgtilrvhpniqnpdpa
vyqlrdskksvclftdfdsqtnvsqskdsdvyitdkcvldmrsmdfksnsavawsndfac
anafnnsiipedtffp
- Chain 'B':
Sequence; same for both SEQRES and ATOM records: (download)
>6mnmB (B:)
avtqsprnkvavtggkvtlscnqtnnhnnmywyrqdtghglrlihysygagstekgdipd
gykasrpsqenfslilelatpsqtsvyfcasgdfwgdtlyfgagtrlsvledlknvfppe
vavfepseaeishtqkatlvclatgfypdhvelswwvngkevhsgvctdpqplkeqpaln
dsryalssrlrvsatfwqnprnhfrcqvqfyglsendewtqdrakpvtqivsaeawgra
- Chain 'C':
Sequence, based on SEQRES records: (download)
>6mnmC (C:)
aieadhvgtygisvyqspgdigqytfefdgdelfyvdldkketvwmlpefgqlasfdpqg
glqniavvkhnlgvltkrsnstpatneapqatvfpkspvllgqpntlicfvdnifppvin
itwlrnsksvadgvyetsffvnrdysfhklsyltfipsdddiydckvehwgleepvlkhw
Sequence, based on observed residues (ATOM records): (download)
>6mnmC (C:)
aieadhvgtygisvyqspgdigqytfefdgdelfyvdldkketvwmlpefgqlasfdpqg
glqniavvkhnlgvltkrsnstpatneapqatvfpkspvllgqpntlicfvdnifppvin
itwlrnsksvagvyetsffvnrdysfhklsyltfipsdddiydckvehwgleepvlkhw
- Chain 'D':
No sequence available.