PDB entry 6mng
View 6mng on RCSB PDB site
Description: 4738 TCR bound to IAb Padi4
Class: immune system
Keywords: T cell receptor, Major Histocompatibility Complex, IMMUNE SYSTEM
Deposited on
2018-10-01, released
2019-07-03
The last revision prior to the SCOPe 2.08 freeze date was dated
2019-07-31, with a file datestamp of
2019-07-26.
Experiment type: XRAY
Resolution: 2.66 Å
R-factor: N/A
AEROSPACI score: 0.17
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: 4738 TCR alpha chain
Species: Mus musculus [TaxId:10090]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d6mnga1, d6mnga2 - Chain 'B':
Compound: 4738 TCR beta chain
Species: Mus musculus [TaxId:10090]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d6mngb1, d6mngb2 - Chain 'C':
Compound: H-2 class II histocompatibility antigen, A-B alpha chain
Species: Mus musculus [TaxId:10090]
Gene: H2-Aa
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d6mngc1, d6mngc2 - Chain 'D':
Compound: Padi4 (92-105) peptide and MHCII I-Ab beta chain
Species: Mus musculus [TaxId:10090]
Gene: H2-Ab1, H2-iabeta
Database cross-references and differences (RAF-indexed):
- Heterogens: HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>6mngA (A:)
mqqvrqspqsltvwegetailncsyensafdylpwyqqfpgegpalliairsvsdkkedg
rftiffnkrekklslhitdsqpgdsatyfcagidtgantgkltfghgtilrvhpniqnpd
pavyqlrdskssdksvclftdfdsqtnvsqskdsdvyitdkcvldmrsmdfksnsavaws
nksdfacanafnnsiipedtffpspess
Sequence, based on observed residues (ATOM records): (download)
>6mngA (A:)
qvrqspqsltvwegetailncsyensafdylpwyqqfpgegpalliairsvsdkkedgrf
tiffnkrekklslhitdsqpgdsatyfcagidtgantgkltfghgtilrvhpniqnpdpa
vyqlrdskdksvclftdfdsqtnvsqskdsdvyitdkcvldmrsmdfksnsavawsnksd
facanafnnsiipedtffp
- Chain 'B':
Sequence; same for both SEQRES and ATOM records: (download)
>6mngB (B:)
avtqsprnkvavtggkvtlscnqtnnhnnmywyrqdtghglrlihysygagstekgdipd
gykasrpsqenfslilelatpsqtsvyfcasgdfwgdtlyfgagtrlsvledlknvfppe
vavfepseaeishtqkatlvclatgfypdhvelswwvngkevhsgvctdpqplkeqpaln
dsryalssrlrvsatfwqnprnhfrcqvqfyglsendewtqdrakpvtqivsaeawgra
- Chain 'C':
Sequence, based on SEQRES records: (download)
>6mngC (C:)
ieadhvgtygisvyqspgdigqytfefdgdelfyvdldkketvwmlpefgqlasfdpqgg
lqniavvkhnlgvltkrsnstpatneapqatvfpkspvllgqpntlicfvdnifppvini
twlrnsksvadgvyetsffvnrdysfhklsyltfipsdddiydckvehwgleepvlkhw
Sequence, based on observed residues (ATOM records): (download)
>6mngC (C:)
ieadhvgtygisvyqspgdigqytfefdgdelfyvdldkketvwmlpefgqlasfdpqgg
lqniavvkhnlgvltkrsnstpatneapqatvfpkspvllgqpntlicfvdnifppvini
twlnsksvadgvyetsffvnrdysfhklsyltfipsydckvehwgleepvlkhw
- Chain 'D':
No sequence available.