PDB entry 6kg6

View 6kg6 on RCSB PDB site
Description: Crystal structure of MavC/UBE2N-Ub complex
Class: hydrolase/transferase
Keywords: complex, deamidase, ubiquitin, HYDROLASE, HYDROLASE-TRANSFERASE complex
Deposited on 2019-07-10, released 2020-04-01
The last revision prior to the SCOPe 2.07 freeze date was dated 2020-04-01, with a file datestamp of 2020-03-27.
Experiment type: XRAY
Resolution: 2.39 Å
R-factor: N/A
AEROSPACI score: 0.22 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'B':
    Compound: MavC
    Species: Legionella pneumophila [TaxId:446]
    Gene: C3927_10720
    Database cross-references and differences (RAF-indexed):
    • Uniprot A0A2S6F4I5 (5-End)
      • expression tag (1-4)
      • engineered mutation (72)
  • Chain 'C':
    Compound: Ubiquitin-40S ribosomal protein S27a
    Species: Homo sapiens [TaxId:9606]
    Gene: RPS27A
    Database cross-references and differences (RAF-indexed):
    • Uniprot J3QTR3 (3-End)
      • expression tag (1-2)
    Domains in SCOPe 2.07: d6kg6c1, d6kg6c2
  • Chain 'G':
    Compound: Ubiquitin-conjugating enzyme E2 N
    Species: Homo sapiens [TaxId:9606]
    Gene: UBE2N, BLU
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d6kg6g_
  • Heterogens: HOH

PDB Chain Sequences:

  • Chain 'B':
    No sequence available.

  • Chain 'C':
    Sequence, based on SEQRES records: (download)
    >6kg6C (C:)
    gshmqifvktltgktitlevepsdtienvkakiqdkegippdqqrlifagkqledgrtls
    dyniqkestlhlvlrlrgg
    

    Sequence, based on observed residues (ATOM records): (download)
    >6kg6C (C:)
    shmqifvktltgktitlevepsdtienvkakiqdkegippdqqrlifagkqledgrtlsd
    yniqkestlhlvlrl
    

  • Chain 'G':
    Sequence, based on SEQRES records: (download)
    >6kg6G (G:)
    maglprriiketqrllaepvpgikaepdesnaryfhvviagpqdspfeggtfklelflpe
    eypmaapkvrfmtkiyhpnvdklgricldilkdkwspalqirtvllsiqallsapnpddp
    landvaeqwktneaqaietarawtrlyamnni
    

    Sequence, based on observed residues (ATOM records): (download)
    >6kg6G (G:)
    maglprriiketqrllaepvpgikaepdesnaryfhvviagpqdspfeggtfklelflpe
    eypmaapkvrfmtkiyhpnvdklgricldilkdkwspalqirtvllsiqallsapnpddp
    landvaeqwktneaqaietarawtrlyamnn