PDB entry 6kfp

View 6kfp on RCSB PDB site
Description: Crystal structure of MavC ternary complex
Class: antitoxin/transferase
Keywords: deamidase, complex, ANTITOXIN, ANTITOXIN-TRANSFERASE complex
Deposited on 2019-07-08, released 2020-04-01
The last revision prior to the SCOPe 2.07 freeze date was dated 2020-04-01, with a file datestamp of 2020-03-27.
Experiment type: XRAY
Resolution: 2.92 Å
R-factor: N/A
AEROSPACI score: 0.15 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: MavC
    Species: Legionella pneumophila [TaxId:446]
    Gene: C3927_10720
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: Ubiquitin-conjugating enzyme E2 N
    Species: Homo sapiens [TaxId:9606]
    Gene: UBE2N, BLU
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d6kfpb_
  • Chain 'D':
    Compound: Ubiquitin-40S ribosomal protein S27a
    Species: Homo sapiens [TaxId:9606]
    Gene: RPS27A
    Database cross-references and differences (RAF-indexed):
    • Uniprot J3QTR3 (1-End)
      • expression tag (0)
    Domains in SCOPe 2.07: d6kfpd1, d6kfpd2

PDB Chain Sequences:

  • Chain 'A':
    No sequence available.

  • Chain 'B':
    Sequence, based on SEQRES records: (download)
    >6kfpB (B:)
    maglprriiketqrllaepvpgikaepdesnaryfhvviagpqdspfeggtfklelflpe
    eypmaapkvrfmtkiyhpnvdklgricldilkdkwspalqirtvllsiqallsapnpddp
    landvaeqwktneaqaietarawtrlyamnni
    

    Sequence, based on observed residues (ATOM records): (download)
    >6kfpB (B:)
    glprriiketqrllaepvpgikaepdesnaryfhvviagpqdspfeggtfklelflpeey
    pmaapkvrfmtkiyhpnvdklgricldilkdkwspalqirtvllsiqallsapnpddpla
    ndvaeqwktneaqaietarawtrlyamn
    

  • Chain 'D':
    Sequence, based on SEQRES records: (download)
    >6kfpD (D:)
    hmqifvktltgktitlevepsdtienvkakiqdkegippdqqrlifagkqledgrtlsdy
    niqkestlhlvlrlrgg
    

    Sequence, based on observed residues (ATOM records): (download)
    >6kfpD (D:)
    hmqifvktltgktitlevepsdtienvkakiqdkegippdqqrlifagkqledgrtlsdy
    niqkestlhlvlrl