SCOPe 2.07: Structural Classification of Proteins

PDB entry 6juw

View 6juw on RCSB PDB site
Description: bovine heart cytochrome c oxidase in catalitic intermediates at 1.80 angstrom resolution
Class: oxidoreductase
Keywords: Cytochrome c oxidase membrane protein respiratory enzyme heme protein, MEMBRANE PROTEIN, OXIDOREDUCTASE
Deposited on 2019-04-15, released 2020-03-25
The last revision prior to the SCOPe 2.07 freeze date was dated 2020-03-25, with a file datestamp of 2020-03-20.
Experiment type: XRAY
Resolution: 1.8 Å
R-factor: N/A
AEROSPACI score: 0.37 (click here for full SPACI score report)

Chains and heterogens:

Chain 'A':
Compound: Cytochrome c oxidase subunit 1
Species: Bos taurus [TaxId:9913]
Database cross-references and differences (RAF-indexed):
- Uniprot P00396 (0-513)
Domains in SCOPe 2.07: d6juwa_
Chain 'B':
Compound: Cytochrome c oxidase subunit 2
Species: Bos taurus [TaxId:9913]
Database cross-references and differences (RAF-indexed):
- Uniprot P68530 (0-226)
Domains in SCOPe 2.07: d6juwb1, d6juwb2
Chain 'C':
Compound: Cytochrome c oxidase subunit 3
Species: Bos taurus [TaxId:9913]
Database cross-references and differences (RAF-indexed):
- Uniprot P00415 (0-258)
Domains in SCOPe 2.07: d6juwc_
Chain 'D':
Compound: cytochrome c oxidase subunit 4 isoform 1, mitochondrial
Species: Bos taurus [TaxId:9913]
Database cross-references and differences (RAF-indexed):
- Uniprot P00423 (0-143)
Domains in SCOPe 2.07: d6juwd_
Chain 'E':
Compound: cytochrome c oxidase subunit 5a, mitochondrial
Species: Bos taurus [TaxId:9913]
Database cross-references and differences (RAF-indexed):
- Uniprot P00426 (0-104)
Domains in SCOPe 2.07: d6juwe_
Chain 'F':
Compound: Cytochrome c oxidase subunit 5B
Species: Bos taurus [TaxId:9913]
Database cross-references and differences (RAF-indexed):
- Uniprot P00428 (0-97)
Domains in SCOPe 2.07: d6juwf_
Chain 'G':
Compound: Cytochrome c oxidase subunit 6A2, mitochondrial
Species: Bos taurus [TaxId:9913]
Database cross-references and differences (RAF-indexed):
- Uniprot P07471 (0-83)
Domains in SCOPe 2.07: d6juwg_
Chain 'H':
Compound: Cytochrome c oxidase subunit 6B1
Species: Bos taurus [TaxId:9913]
Database cross-references and differences (RAF-indexed):
- Uniprot P00429 (0-78)
Domains in SCOPe 2.07: d6juwh_
Chain 'I':
Compound: Cytochrome c oxidase subunit 6C
Species: Bos taurus [TaxId:9913]
Database cross-references and differences (RAF-indexed):
- Uniprot P04038 (0-72)
Domains in SCOPe 2.07: d6juwi_
Chain 'J':
Compound: cytochrome c oxidase subunit 7a1, mitochondrial
Species: Bos taurus [TaxId:9913]
Database cross-references and differences (RAF-indexed):
- Uniprot P07470 (0-57)
Domains in SCOPe 2.07: d6juwj_
Chain 'K':
Compound: cytochrome c oxidase subunit 7b, mitochondrial
Species: Bos taurus [TaxId:9913]
Database cross-references and differences (RAF-indexed):
- Uniprot P13183 (0-48)
Domains in SCOPe 2.07: d6juwk_
Chain 'L':
Compound: cytochrome c oxidase subunit 7c, mitochondrial
Species: Bos taurus [TaxId:9913]
Database cross-references and differences (RAF-indexed):
- Uniprot P00430 (0-45)
Domains in SCOPe 2.07: d6juwl_
Chain 'M':
Compound: cytochrome c oxidase subunit 8b, mitochondrial
Species: Bos taurus [TaxId:9913]
Database cross-references and differences (RAF-indexed):
- Uniprot P10175 (0-42)
Domains in SCOPe 2.07: d6juwm_
Chain 'N':
Compound: Cytochrome c oxidase subunit 1
Species: Bos taurus [TaxId:9913]
Database cross-references and differences (RAF-indexed):
- Uniprot P00396 (0-513)
Domains in SCOPe 2.07: d6juwn_
Chain 'O':
Compound: Cytochrome c oxidase subunit 2
Species: Bos taurus [TaxId:9913]
Database cross-references and differences (RAF-indexed):
- Uniprot P68530 (0-226)
Domains in SCOPe 2.07: d6juwo1, d6juwo2
Chain 'P':
Compound: Cytochrome c oxidase subunit 3
Species: Bos taurus [TaxId:9913]
Database cross-references and differences (RAF-indexed):
- Uniprot P00415 (0-258)
Domains in SCOPe 2.07: d6juwp_
Chain 'Q':
Compound: cytochrome c oxidase subunit 4 isoform 1, mitochondrial
Species: Bos taurus [TaxId:9913]
Database cross-references and differences (RAF-indexed):
- Uniprot P00423 (0-143)
Domains in SCOPe 2.07: d6juwq_
Chain 'R':
Compound: cytochrome c oxidase subunit 5a, mitochondrial
Species: Bos taurus [TaxId:9913]
Database cross-references and differences (RAF-indexed):
- Uniprot P00426 (0-104)
Domains in SCOPe 2.07: d6juwr_
Chain 'S':
Compound: Cytochrome c oxidase subunit 5B
Species: Bos taurus [TaxId:9913]
Database cross-references and differences (RAF-indexed):
- Uniprot P00428 (0-97)
Domains in SCOPe 2.07: d6juws_
Chain 'T':
Compound: Cytochrome c oxidase subunit 6A2, mitochondrial
Species: Bos taurus [TaxId:9913]
Database cross-references and differences (RAF-indexed):
- Uniprot P07471 (0-83)
Domains in SCOPe 2.07: d6juwt_
Chain 'U':
Compound: Cytochrome c oxidase subunit 6B1
Species: Bos taurus [TaxId:9913]
Database cross-references and differences (RAF-indexed):
- Uniprot P00429 (0-78)
Domains in SCOPe 2.07: d6juwu_
Chain 'V':
Compound: Cytochrome c oxidase subunit 6C
Species: Bos taurus [TaxId:9913]
Database cross-references and differences (RAF-indexed):
- Uniprot P04038 (0-72)
Domains in SCOPe 2.07: d6juwv_
Chain 'W':
Compound: cytochrome c oxidase subunit 7a1, mitochondrial
Species: Bos taurus [TaxId:9913]
Database cross-references and differences (RAF-indexed):
- Uniprot P07470 (0-57)
Domains in SCOPe 2.07: d6juww_
Chain 'X':
Compound: cytochrome c oxidase subunit 7b, mitochondrial
Species: Bos taurus [TaxId:9913]
Database cross-references and differences (RAF-indexed):
- Uniprot P13183 (0-48)
Domains in SCOPe 2.07: d6juwx_
Chain 'Y':
Compound: cytochrome c oxidase subunit 7c, mitochondrial
Species: Bos taurus [TaxId:9913]
Database cross-references and differences (RAF-indexed):
- Uniprot P00430 (0-45)
Domains in SCOPe 2.07: d6juwy_
Chain 'Z':
Compound: cytochrome c oxidase subunit 8b, mitochondrial
Species: Bos taurus [TaxId:9913]
Database cross-references and differences (RAF-indexed):
- Uniprot P10175 (0-42)
Domains in SCOPe 2.07: d6juwz_
Heterogens: HEA, CU, MG, NA, DMU, PGV, PSC, TGL, EDO, CUA, CHD, CDL, PEK, ZN, PO4, HOH

PDB Chain Sequences:

Chain 'A':
Sequence; same for both SEQRES and ATOM records: (download)

>6juwA (A:)
mfinrwlfstnhkdigtlyllfgawagmvgtalslliraelgqpgtllgddqiynvvvta
hafvmiffmvmpimiggfgnwlvplmigapdmafprmnnmsfwllppsfllllassmvea
gagtgwtvypplagnlahagasvdltifslhlagvssilgainfittiinmkppamsqyq
tplfvwsvmitavllllslpvlaagitmlltdrnlnttffdpagggdpilyqhlfwffgh
pevyililpgfgmishivtyysgkkepfgymgmvwammsigflgfivwahhmftvgmdvd
trayftsatmiiaiptgvkvfswlatlhggnikwspammwalgfiflftvggltgivlan
ssldivlhdtyyvvahfhyvlsmgavfaimggfvhwfplfsgytlndtwakihfaimfvg
vnmtffpqhflglsgmprrysdypdaytmwntissmgsfisltavmlmvfiiweafaskr
evltvdltttnlewlngcpppyhtfeeptyvnlk

Chain 'B':
Sequence; same for both SEQRES and ATOM records: (download)

>6juwB (B:)
maypmqlgfqdatspimeellhfhdhtlmivflisslvlyiislmlttklthtstmdaqe
vetiwtilpaiililialpslrilymmdeinnpsltvktmghqwywsyeytdyedlsfds
ymiptselkpgelrllevdnrvvlpmemtirmlvssedvlhswavpslglktdaipgrln
qttlmssrpglyygqcseicgsnhsfmpivlelvplkyfekwsasml

Chain 'C':
Sequence; same for both SEQRES and ATOM records: (download)

>6juwC (C:)
hqthayhmvnpspwpltgalsallmtsgltmwfhfnsmtllmiglttnmltmyqwwrdvi
restfqghhtpavqkglrygmilfiisevlfftgffwafyhsslaptpelggcwpptgih
plnplevpllntsvllasgvsitwahhslmegdrkhmlqalfititlgvyftllqaseyy
eapftisdgvygstffvatgfhglhviigstflivcffrqlkfhftsnhhfgfeaaawyw
hfvdvvwlflyvsiywwgs

Chain 'D':
Sequence; same for both SEQRES and ATOM records: (download)

>6juwD (D:)
svvksedyalpsyvdrrdyplpdvahvknlsasqkalkekekaswsslsidekvelyrlk
fkesfaemnrstnewktvvgaamffigftallliwekhyvygpiphtfeeewvakqtkrm
ldmkvapiqgfsakwdydknewkk

Chain 'E':
Sequence; same for both SEQRES and ATOM records: (download)

>6juwE (E:)
hetdeefdarwvtyfnkpdidawelrkgmntlvgydlvpepkiidaalracrrlndfasa
vrilevvkdkagphkeiypyviqelrptlnelgistpeelgldkv

Chain 'F':
Sequence; same for both SEQRES and ATOM records: (download)

>6juwF (F:)
asgggvptdeeqatglerevmlaarkgqdpynilapkatsgtkedpnlvpsitnkrivgc
iceednstviwfwlhkgeaqrcpscgthyklvphqlah

Chain 'G':
Sequence; same for both SEQRES and ATOM records: (download)

>6juwG (G:)
asaakgdhggtgartwrfltfglalpsvalctlnswlhsghrerpafipyhhlrirtkpf
swgdgnhtffhnprvnplptgyek

Chain 'H':
Sequence; same for both SEQRES and ATOM records: (download)

>6juwH (H:)
kiknyqtapfdsrfpnqnqtrncwqnyldfhrcekamtakggdvsvcewyrrvykslcpi
swvstwddrraegtfpgki

Chain 'I':
Sequence; same for both SEQRES and ATOM records: (download)

>6juwI (I:)
stalakpqmrgllarrlrfhivgafmvslgfatfykfavaekrkkayadfyrnydsmkdf
eemrkagifqsak

Chain 'J':
Sequence; same for both SEQRES and ATOM records: (download)

>6juwJ (J:)
fenrvaekqklfqednglpvhlkggatdnilyrvtmtlclggtlyslyclgwasfphk

Chain 'K':
Sequence; same for both SEQRES and ATOM records: (download)
```
>6juwK (K:)
apdfhdkygnavlasgatfcvavwvymatqigiewnpspvgrvtpkewr
```
Chain 'L':
Sequence; same for both SEQRES and ATOM records: (download)
```
>6juwL (L:)
hyeegpgknipfsvenkwrllammtlffgsgfaapffivrhqllkk
```
Chain 'M':
Sequence; same for both SEQRES and ATOM records: (download)
```
>6juwM (M:)
itakpaktptspkeqaiglsvtflsfllpagwvlyhldnykks
```

Chain 'N':
Sequence; same for both SEQRES and ATOM records: (download)

>6juwN (N:)
mfinrwlfstnhkdigtlyllfgawagmvgtalslliraelgqpgtllgddqiynvvvta
hafvmiffmvmpimiggfgnwlvplmigapdmafprmnnmsfwllppsfllllassmvea
gagtgwtvypplagnlahagasvdltifslhlagvssilgainfittiinmkppamsqyq
tplfvwsvmitavllllslpvlaagitmlltdrnlnttffdpagggdpilyqhlfwffgh
pevyililpgfgmishivtyysgkkepfgymgmvwammsigflgfivwahhmftvgmdvd
trayftsatmiiaiptgvkvfswlatlhggnikwspammwalgfiflftvggltgivlan
ssldivlhdtyyvvahfhyvlsmgavfaimggfvhwfplfsgytlndtwakihfaimfvg
vnmtffpqhflglsgmprrysdypdaytmwntissmgsfisltavmlmvfiiweafaskr
evltvdltttnlewlngcpppyhtfeeptyvnlk

Chain 'O':
Sequence; same for both SEQRES and ATOM records: (download)

>6juwO (O:)
maypmqlgfqdatspimeellhfhdhtlmivflisslvlyiislmlttklthtstmdaqe
vetiwtilpaiililialpslrilymmdeinnpsltvktmghqwywsyeytdyedlsfds
ymiptselkpgelrllevdnrvvlpmemtirmlvssedvlhswavpslglktdaipgrln
qttlmssrpglyygqcseicgsnhsfmpivlelvplkyfekwsasml

Chain 'P':
Sequence; same for both SEQRES and ATOM records: (download)

>6juwP (P:)
hqthayhmvnpspwpltgalsallmtsgltmwfhfnsmtllmiglttnmltmyqwwrdvi
restfqghhtpavqkglrygmilfiisevlfftgffwafyhsslaptpelggcwpptgih
plnplevpllntsvllasgvsitwahhslmegdrkhmlqalfititlgvyftllqaseyy
eapftisdgvygstffvatgfhglhviigstflivcffrqlkfhftsnhhfgfeaaawyw
hfvdvvwlflyvsiywwgs

Chain 'Q':
Sequence; same for both SEQRES and ATOM records: (download)

>6juwQ (Q:)
svvksedyalpsyvdrrdyplpdvahvknlsasqkalkekekaswsslsidekvelyrlk
fkesfaemnrstnewktvvgaamffigftallliwekhyvygpiphtfeeewvakqtkrm
ldmkvapiqgfsakwdydknewkk

Chain 'R':
Sequence; same for both SEQRES and ATOM records: (download)

>6juwR (R:)
hetdeefdarwvtyfnkpdidawelrkgmntlvgydlvpepkiidaalracrrlndfasa
vrilevvkdkagphkeiypyviqelrptlnelgistpeelgldkv

Chain 'S':
Sequence; same for both SEQRES and ATOM records: (download)

>6juwS (S:)
asgggvptdeeqatglerevmlaarkgqdpynilapkatsgtkedpnlvpsitnkrivgc
iceednstviwfwlhkgeaqrcpscgthyklvphqlah

Chain 'T':
Sequence; same for both SEQRES and ATOM records: (download)

>6juwT (T:)
asaakgdhggtgartwrfltfglalpsvalctlnswlhsghrerpafipyhhlrirtkpf
swgdgnhtffhnprvnplptgyek

Chain 'U':
Sequence; same for both SEQRES and ATOM records: (download)

>6juwU (U:)
kiknyqtapfdsrfpnqnqtrncwqnyldfhrcekamtakggdvsvcewyrrvykslcpi
swvstwddrraegtfpgki

Chain 'V':
Sequence; same for both SEQRES and ATOM records: (download)

>6juwV (V:)
stalakpqmrgllarrlrfhivgafmvslgfatfykfavaekrkkayadfyrnydsmkdf
eemrkagifqsak

Chain 'W':
Sequence; same for both SEQRES and ATOM records: (download)

>6juwW (W:)
fenrvaekqklfqednglpvhlkggatdnilyrvtmtlclggtlyslyclgwasfphk

Chain 'X':
Sequence; same for both SEQRES and ATOM records: (download)
```
>6juwX (X:)
apdfhdkygnavlasgatfcvavwvymatqigiewnpspvgrvtpkewr
```
Chain 'Y':
Sequence; same for both SEQRES and ATOM records: (download)
```
>6juwY (Y:)
hyeegpgknipfsvenkwrllammtlffgsgfaapffivrhqllkk
```
Chain 'Z':
Sequence; same for both SEQRES and ATOM records: (download)
```
>6juwZ (Z:)
itakpaktptspkeqaiglsvtflsfllpagwvlyhldnykks
```