PDB entry 6iyk

View 6iyk on RCSB PDB site
Description: The structure of EntE with 2-nitrobenzoyl adenylate analog
Class: ligase
Keywords: LIGASE, adenylation, non-ribosomal peptide biosynthesis
Deposited on 2018-12-17, released 2019-04-17
The last revision prior to the SCOPe 2.08 freeze date was dated 2019-05-29, with a file datestamp of 2019-05-24.
Experiment type: XRAY
Resolution: 2.45 Å
R-factor: N/A
AEROSPACI score: 0.22 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: 2,3-dihydroxybenzoate-AMP ligase component of enterobactin synthase multienzyme complex
    Species: Escherichia coli 1303 [TaxId:745156]
    Gene: entE, EC1303_c05680
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6iyka_
  • Chain 'B':
    Compound: 2,3-dihydroxybenzoate-AMP ligase component of enterobactin synthase multienzyme complex
    Species: Escherichia coli 1303 [TaxId:745156]
    Gene: entE, EC1303_c05680
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6iykb_
  • Heterogens: B1U, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download)
    >6iykA (A:)
    msipftrwpeefarryrekgywqdlpltdiltrhaasdsiavidgerqlsyrelnqaadn
    lacslrrqgikpgetalvqlgnvaelyitffallklgvapvlalfshqrselnayasqie
    palliadrqhalfsgddflntfvtehssirvvqllndsgehnlqdainhpaedftatpsp
    adevayfqlsggttgtpkliprthndyyysvrrsveicqftqqtrylcaipaahgyamss
    pgslgvflaggtvvlaadpsatlcfpliekhqvnvtalvppavslwlqaliegesraqla
    slkllqvggarlsatlaaripaeigcqlqqvfgmaeglvnytrlddsaekiihtqgypmc
    pddevwvadaegnplpqgevgrlmtrgpytfrgyykspqhnasafdangfycsgdlisid
    pegyitvqgrekdqinrggekiaaeeienlllrhpaviyaalvsmedelmgekscaylvv
    keplravqvrrflreqgiaefklpdrvecvdslpltavgkvdkkqlrqwlasrasatnss
    svdklaaalehhhhhh
    

    Sequence, based on observed residues (ATOM records): (download)
    >6iykA (A:)
    ipftrwpeefarryrekgywqdlpltdiltrhaasdsiavidgerqlsyrelnqaadnla
    cslrrqgikpgetalvqlgnvaelyitffallklgvapvlalfshqrselnayasqiepa
    lliadrqhalfsgddflntfvtehssirvvqllndsgehnlqdainhpaedftatpspad
    evayfqlsggttgtpkliprthndyyysvrrsveicqftqqtrylcaipaahgyamsspg
    slgvflaggtvvlaadpsatlcfpliekhqvnvtalvppavslwlqaliegesraqlasl
    kllqvggarlsatlaaripaeigcqlqqvfgmaeglvnytrlddsaekiihtqgypmcpd
    devwvadaegnplpqgevgrlmtrgpytfrgyykspqhnasafdangfycsgdlisidpe
    gyitvqgrekdqinrggekiaaeeienlllrhpaviyaalvsmedelmgekscaylvvke
    plravqvrrflreqgiaefklpdrvecvdslplvdkkqlrq
    

  • Chain 'B':
    Sequence, based on SEQRES records: (download)
    >6iykB (B:)
    msipftrwpeefarryrekgywqdlpltdiltrhaasdsiavidgerqlsyrelnqaadn
    lacslrrqgikpgetalvqlgnvaelyitffallklgvapvlalfshqrselnayasqie
    palliadrqhalfsgddflntfvtehssirvvqllndsgehnlqdainhpaedftatpsp
    adevayfqlsggttgtpkliprthndyyysvrrsveicqftqqtrylcaipaahgyamss
    pgslgvflaggtvvlaadpsatlcfpliekhqvnvtalvppavslwlqaliegesraqla
    slkllqvggarlsatlaaripaeigcqlqqvfgmaeglvnytrlddsaekiihtqgypmc
    pddevwvadaegnplpqgevgrlmtrgpytfrgyykspqhnasafdangfycsgdlisid
    pegyitvqgrekdqinrggekiaaeeienlllrhpaviyaalvsmedelmgekscaylvv
    keplravqvrrflreqgiaefklpdrvecvdslpltavgkvdkkqlrqwlasrasatnss
    svdklaaalehhhhhh
    

    Sequence, based on observed residues (ATOM records): (download)
    >6iykB (B:)
    ipftrwpeefarryrekgywqdlpltdiltrhaasdsiavidgerqlsyrelnqaadnla
    cslrrqgikpgetalvqlgnvaelyitffallklgvapvlalfshqrselnayasqiepa
    lliadrqhalfsgddflntfvtehssirvvqllndsgehnlqdainhpaedftatpspad
    evayfqlsggttgtpkliprthndyyysvrrsveicqftqqtrylcaipaahgyamsspg
    slgvflaggtvvlaadpsatlcfpliekhqvnvtalvppavslwlqaliegesraqlasl
    kllqvggarlsatlaaripaeigcqlqqvfgmaeglvnytrlddsaekiihtqgypmcpd
    devwvadaegnplpqgevgrlmtrgpytfrgyykspqhnasafdangfycsgdlisidpe
    gyitvqgrekdqinrggekiaaeeienlllrhpaviyaalvsmedelmgekscaylvvke
    plravqvrrflreqgiaefklpdrvecvdslpltkvdkkqlrq