PDB entry 6if1
View 6if1 on RCSB PDB site
Description: Crystal structure of Ube2K and K48-linked di-ubiquitin complex
Class: ligase
Keywords: complex, LIGASE
Deposited on
2018-09-18, released
2018-11-21
The last revision prior to the SCOPe 2.08 freeze date was dated
2018-11-21, with a file datestamp of
2018-11-16.
Experiment type: XRAY
Resolution: 2.47 Å
R-factor: N/A
AEROSPACI score: 0.21
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: Ubiquitin-conjugating enzyme E2 K
Species: Homo sapiens [TaxId:9606]
Gene: UBE2K, HIP2, LIG
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d6if1a1, d6if1a2 - Chain 'B':
Compound: Ubiquitin-conjugating enzyme E2 K
Species: Homo sapiens [TaxId:9606]
Gene: UBE2K, HIP2, LIG
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d6if1b1, d6if1b2 - Chain 'C':
Compound: Ubiquitin
Species: Homo sapiens [TaxId:9606]
Gene: UBB
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d6if1c_ - Chain 'D':
Compound: Ubiquitin
Species: Homo sapiens [TaxId:9606]
Gene: UBB
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d6if1d_ - Heterogens: HOH
PDB Chain Sequences:
- Chain 'A':
Sequence; same for both SEQRES and ATOM records: (download)
>6if1A (A:)
maniavqrikrefkevlkseetsknqikvdlvdenftelrgeiagppdtpyeggryqlei
kipetypfnppkvrfitkiwhpnissvtgaicldilkdqwaaamtlrtvllslqallaaa
epddpqdavvanqykqnpemfkqtarlwahvyagapvsspeytkkienlcamgfdrnavi
valsskswdvetatellls
- Chain 'B':
Sequence; same for both SEQRES and ATOM records: (download)
>6if1B (B:)
maniavqrikrefkevlkseetsknqikvdlvdenftelrgeiagppdtpyeggryqlei
kipetypfnppkvrfitkiwhpnissvtgaicldilkdqwaaamtlrtvllslqallaaa
epddpqdavvanqykqnpemfkqtarlwahvyagapvsspeytkkienlcamgfdrnavi
valsskswdvetatellls
- Chain 'C':
Sequence; same for both SEQRES and ATOM records: (download)
>6if1C (C:)
mqifvktltgktitlevepsdtienvkakiqdkegippdqqrlifagkqledgrtlsdyn
iqkestlhlvlrlrgg
- Chain 'D':
Sequence; same for both SEQRES and ATOM records: (download)
>6if1D (D:)
mqifvktltgktitlevepsdtienvkakiqdkegippdqqrlifagkqledgrtlsdyn
iqkestlhlvlrlrgg