PDB entry 6h71
View 6h71 on RCSB PDB site
Description: GI.1 human norovirus protruding domain in complex with Nano-94
Class: viral protein
Keywords: Norovirus, GI.1, P domain, Nano-94, VIRAL PROTEIN
Deposited on
2018-07-30, released
2018-12-19
The last revision prior to the SCOPe 2.08 freeze date was dated
2019-03-13, with a file datestamp of
2019-03-08.
Experiment type: XRAY
Resolution: 2.31 Å
R-factor: N/A
AEROSPACI score: 0.24
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: Capsid protein VP1
Species: Norwalk virus (strain GI/Human/United States/Norwalk/1968) [TaxId:524364]
Gene: ORF2
Database cross-references and differences (RAF-indexed):
- Chain 'B':
Compound: Capsid protein VP1
Species: Norwalk virus (strain GI/Human/United States/Norwalk/1968) [TaxId:524364]
Gene: ORF2
Database cross-references and differences (RAF-indexed):
- Chain 'C':
Compound: Nanobody (VHH) Nano-94
Species: Vicugna pacos [TaxId:30538]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d6h71c1, d6h71c2 - Chain 'D':
Compound: Nanobody (VHH) Nano-94
Species: Vicugna pacos [TaxId:30538]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d6h71d1, d6h71d2 - Heterogens: EDO, HOH
PDB Chain Sequences:
- Chain 'A':
No sequence available.
- Chain 'B':
No sequence available.
- Chain 'C':
Sequence, based on SEQRES records: (download)
>6h71C (C:)
qvqlqesggglvqaggslrlscaasgrmfsinsmgwyrqapgkerelvatiseagtttya
dsvrgrftiardnakntvylqmnslnpedtavyycnayiqldstiwfraywgqgtqvtvs
sgrypydvpdygsgra
Sequence, based on observed residues (ATOM records): (download)
>6h71C (C:)
qvqlqesggglvqaggslrlscaasgrmfsinsmgwyrqapgkerelvatiseagtttya
dsvrgrftiardnakntvylqmnslnpedtavyycnayiqldstiwfraywgqgtqvtvs
s
- Chain 'D':
Sequence, based on SEQRES records: (download)
>6h71D (D:)
qvqlqesggglvqaggslrlscaasgrmfsinsmgwyrqapgkerelvatiseagtttya
dsvrgrftiardnakntvylqmnslnpedtavyycnayiqldstiwfraywgqgtqvtvs
sgrypydvpdygsgra
Sequence, based on observed residues (ATOM records): (download)
>6h71D (D:)
qvqlqesggglvqaggslrlscaasgrmfsinsmgwyrqapgkerelvatiseagtttya
dsvrgrftiardnakntvylqmnslnpedtavyycnayiqldstiwfraywgqgtqvtvs
s