PDB entry 6gbk
View 6gbk on RCSB PDB site
Description: Repertoires of functionally diverse enzymes through computational design at epistatic active-site positions
Class: hydrolase
Keywords: Phosphotriesterase, HYDROLASE
Deposited on
2018-04-15, released
2018-10-24
The last revision prior to the SCOPe 2.08 freeze date was dated
2018-10-24, with a file datestamp of
2018-10-19.
Experiment type: XRAY
Resolution: 1.9 Å
R-factor: N/A
AEROSPACI score: 0.34
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: Parathion hydrolase
Species: Brevundimonas diminuta [TaxId:293]
Gene: OPD
Database cross-references and differences (RAF-indexed):
- Uniprot P0A434
- engineered mutation (23)
- engineered mutation (46)
- engineered mutation (75)
- engineered mutation (80)
- engineered mutation (87)
- engineered mutation (151)
- engineered mutation (154)
- engineered mutation (172)
- engineered mutation (183)
- engineered mutation (191)
- engineered mutation (207)
- engineered mutation (223)
- engineered mutation (238)
- engineered mutation (243)
- engineered mutation (262-263)
- engineered mutation (286)
- engineered mutation (312)
- engineered mutation (316-317)
- engineered mutation (319)
- engineered mutation (321)
Domains in SCOPe 2.08: d6gbka_ - Chain 'B':
Compound: Parathion hydrolase
Species: Brevundimonas diminuta [TaxId:293]
Gene: OPD
Database cross-references and differences (RAF-indexed):
- Uniprot P0A434
- engineered mutation (23)
- engineered mutation (46)
- engineered mutation (75)
- engineered mutation (80)
- engineered mutation (87)
- engineered mutation (151)
- engineered mutation (154)
- engineered mutation (172)
- engineered mutation (183)
- engineered mutation (191)
- engineered mutation (207)
- engineered mutation (223)
- engineered mutation (238)
- engineered mutation (243)
- engineered mutation (262-263)
- engineered mutation (286)
- engineered mutation (312)
- engineered mutation (316-317)
- engineered mutation (319)
- engineered mutation (321)
Domains in SCOPe 2.08: d6gbkb_ - Heterogens: FMT, ZN, TRS, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>6gbkA (A:)
tnsgdrintvrgpitiseagftlmhehicgssagflrawpeffgsrdalaekavrglrra
raagvrtivdvstfdlgrdvellaevseaadvhivaatglwfdpplsmrlrsveeltqff
lreiqygiedtgiragiikvattgkatpfqervlraaaraslatgvpvtthtdasqrdge
qqadifesegldpsrvcighsddtddldyltalaargyligldgiphsaiglednasaaa
llglrswqtrallikalidqgyadqilvsndwlfgfssyvtnimdvldrvnpdgmafipl
rvipflrekgvpdetletimvdnparflsptlras
Sequence, based on observed residues (ATOM records): (download)
>6gbkA (A:)
drintvrgpitiseagftlmhehicgssagflrawpeffgsrdalaekavrglrraraag
vrtivdvstfdlgrdvellaevseaadvhivaatglwfdpplsmrlrsveeltqfflrei
qygiedtgiragiikvattgkatpfqervlraaaraslatgvpvtthtdasqrdgeqqad
ifesegldpsrvcighsddtddldyltalaargyligldgiphsaiglednasaaallgl
rswqtrallikalidqgyadqilvsndwlfgfssyvtnimdvldrvnpdgmafiplrvip
flrekgvpdetletimvdnparflspt
- Chain 'B':
Sequence, based on SEQRES records: (download)
>6gbkB (B:)
tnsgdrintvrgpitiseagftlmhehicgssagflrawpeffgsrdalaekavrglrra
raagvrtivdvstfdlgrdvellaevseaadvhivaatglwfdpplsmrlrsveeltqff
lreiqygiedtgiragiikvattgkatpfqervlraaaraslatgvpvtthtdasqrdge
qqadifesegldpsrvcighsddtddldyltalaargyligldgiphsaiglednasaaa
llglrswqtrallikalidqgyadqilvsndwlfgfssyvtnimdvldrvnpdgmafipl
rvipflrekgvpdetletimvdnparflsptlras
Sequence, based on observed residues (ATOM records): (download)
>6gbkB (B:)
drintvrgpitiseagftlmhehicgssagflrawpeffgsrdalaekavrglrraraag
vrtivdvstfdlgrdvellaevseaadvhivaatglwfdpplsmrlrsveeltqfflrei
qygiedtgiragiikvattgkatpfqervlraaaraslatgvpvtthtdasqrdgeqqad
ifesegldpsrvcighsddtddldyltalaargyligldgiphsaiglednasaaallgl
rswqtrallikalidqgyadqilvsndwlfgfssyvtnimdvldrvnpdgmafiplrvip
flrekgvpdetletimvdnparflsptlr