PDB entry 6fno
View 6fno on RCSB PDB site
Description: Caldiarchaeum Subterraneum Ubiquitin:Rpn11-homolog complex, zinc soak
Class: hydrolase
Keywords: deubiquitination, deubiquitylation, JAMM protease, HYDROLASE
Deposited on
2018-02-04, released
2018-07-25
The last revision prior to the SCOPe 2.08 freeze date was dated
2018-07-25, with a file datestamp of
2018-07-20.
Experiment type: XRAY
Resolution: 1.95 Å
R-factor: N/A
AEROSPACI score: 0.33
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: 26S proteasome regulatory subunit N11-like protein
Species: Candidatus Caldiarchaeum subterraneum [TaxId:311458]
Gene: CSUB_C1473, HGMM_F04B03C04, HGMM_F21D07C20, HGMM_F30C12C32
Database cross-references and differences (RAF-indexed):
- Chain 'B':
Compound: 26S proteasome regulatory subunit N11-like protein
Species: Candidatus Caldiarchaeum subterraneum [TaxId:311458]
Gene: CSUB_C1473, HGMM_F04B03C04, HGMM_F21D07C20, HGMM_F30C12C32
Database cross-references and differences (RAF-indexed):
- Chain 'C':
Compound: Ubiquitin-like protein
Species: Candidatus Caldiarchaeum subterraneum [TaxId:311458]
Gene: CSUB_C1474, HGMM_F04B03C03, HGMM_F21D07C21, HGMM_F30C12C33
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d6fnoc1, d6fnoc2 - Chain 'D':
Compound: Ubiquitin-like protein
Species: Candidatus Caldiarchaeum subterraneum [TaxId:311458]
Gene: CSUB_C1474, HGMM_F04B03C03, HGMM_F21D07C21, HGMM_F30C12C33
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d6fnod1, d6fnod2 - Heterogens: ZN, SO4, HOH
PDB Chain Sequences:
- Chain 'A':
No sequence available.
- Chain 'B':
No sequence available.
- Chain 'C':
Sequence, based on SEQRES records: (download)
>6fnoC (C:)
mkhhhhhhpmsdydipttenlyfqghmkikivpavgggsplelevapnatvgavrtkvca
mkklppdttrltykgralkdtetleslgvadgdkfvlitrtvgg
Sequence, based on observed residues (ATOM records): (download)
>6fnoC (C:)
ipttenlyfqghmkikivpavgggsplelevapnatvgavrtkvcamkklppdttrltyk
gralkdtetleslgvadgdkfvlitrtvgg
- Chain 'D':
Sequence, based on SEQRES records: (download)
>6fnoD (D:)
mkhhhhhhpmsdydipttenlyfqghmkikivpavgggsplelevapnatvgavrtkvca
mkklppdttrltykgralkdtetleslgvadgdkfvlitrtvgg
Sequence, based on observed residues (ATOM records): (download)
>6fnoD (D:)
pttenlyfqghmkikivpavgggsplelevapnatvgavrtkvcamkklppdttrltykg
ralkdtetleslgvadgdkfvlitrtvgg