SCOPe 2.08: Structural Classification of Proteins

PDB entry 6d7c

View 6d7c on RCSB PDB site
Description: The crystal structure of hemagglutinin from A/Hong Kong/61/2016 H7N9 influenza virus
Class: viral protein
Keywords: Influenza virus, Surface protein, H7N9, VIRAL PROTEIN
Deposited on 2018-04-24, released 2018-05-30
The last revision prior to the SCOPe 2.08 freeze date was dated 2020-07-29, with a file datestamp of 2020-07-04.
Experiment type: XRAY
Resolution: 2.95 Å
R-factor: N/A
AEROSPACI score: 0.21 (click here for full SPACI score report)

Chains and heterogens:

Chain 'A':
Compound: Hemagglutinin HA1 chain
Species: Influenza A virus [TaxId:11320]
Gene: HA
Database cross-references and differences (RAF-indexed):
- Uniprot A0A0C4ZYE2 (0-End)
  - conflict (46)
  - conflict (226)
Domains in SCOPe 2.08: d6d7ca_
Chain 'B':
Compound: Hemagglutinin HA2 chain
Species: Influenza A virus [TaxId:11320]
Gene: HA
Database cross-references and differences (RAF-indexed):
- Uniprot S4V1Z7 (0-End)
Domains in SCOPe 2.08: d6d7cb_
Chain 'C':
Compound: Hemagglutinin HA1 chain
Species: Influenza A virus [TaxId:11320]
Gene: HA
Database cross-references and differences (RAF-indexed):
- Uniprot A0A0C4ZYE2 (0-End)
  - conflict (46)
  - conflict (226)
Domains in SCOPe 2.08: d6d7cc_
Chain 'D':
Compound: Hemagglutinin HA2 chain
Species: Influenza A virus [TaxId:11320]
Gene: HA
Database cross-references and differences (RAF-indexed):
- Uniprot S4V1Z7 (0-End)
Domains in SCOPe 2.08: d6d7cd_
Chain 'E':
Compound: Hemagglutinin HA1 chain
Species: Influenza A virus [TaxId:11320]
Gene: HA
Database cross-references and differences (RAF-indexed):
- Uniprot A0A0C4ZYE2 (0-End)
  - conflict (46)
  - conflict (226)
Domains in SCOPe 2.08: d6d7ce_
Chain 'F':
Compound: Hemagglutinin HA2 chain
Species: Influenza A virus [TaxId:11320]
Gene: HA
Database cross-references and differences (RAF-indexed):
- Uniprot S4V1Z7 (0-End)
Domains in SCOPe 2.08: d6d7cf_
Chain 'G':
Compound: Hemagglutinin HA1 chain
Species: Influenza A virus [TaxId:11320]
Gene: HA
Database cross-references and differences (RAF-indexed):
- Uniprot A0A0C4ZYE2 (0-End)
  - conflict (46)
  - conflict (226)
Domains in SCOPe 2.08: d6d7cg_
Chain 'H':
Compound: Hemagglutinin HA2 chain
Species: Influenza A virus [TaxId:11320]
Gene: HA
Database cross-references and differences (RAF-indexed):
- Uniprot S4V1Z7 (0-End)
Domains in SCOPe 2.08: d6d7ch_
Chain 'I':
Compound: Hemagglutinin HA1 chain
Species: Influenza A virus [TaxId:11320]
Gene: HA
Database cross-references and differences (RAF-indexed):
- Uniprot A0A0C4ZYE2 (0-End)
  - conflict (46)
  - conflict (226)
Domains in SCOPe 2.08: d6d7ci_
Chain 'J':
Compound: Hemagglutinin HA2 chain
Species: Influenza A virus [TaxId:11320]
Gene: HA
Database cross-references and differences (RAF-indexed):
- Uniprot S4V1Z7 (0-End)
Domains in SCOPe 2.08: d6d7cj_
Chain 'K':
Compound: Hemagglutinin HA1 chain
Species: Influenza A virus [TaxId:11320]
Gene: HA
Database cross-references and differences (RAF-indexed):
- Uniprot A0A0C4ZYE2 (0-End)
  - conflict (46)
  - conflict (226)
Domains in SCOPe 2.08: d6d7ck_
Chain 'L':
Compound: Hemagglutinin HA2 chain
Species: Influenza A virus [TaxId:11320]
Gene: HA
Database cross-references and differences (RAF-indexed):
- Uniprot S4V1Z7 (0-End)
Domains in SCOPe 2.08: d6d7cl_
Heterogens: NAG

PDB Chain Sequences:

Chain 'A':
Sequence, based on SEQRES records: (download)

>6d7cA (A:)
dkiclghhavsngtkvntltergvevvnatetvertnipricskgkrtvdlgqcgllgti
tgppqcdqflefsadliierregsdvcypgkfvneealrqilrksggidkeamgftysgi
rtngatsacrrsgssfyaemkwllsntdnaafpqmtksykntrkspaiivwgihhsvsta
eqtklygsgnklvtvgssnyqqsfvpspgarpqvnglsgridfhwlilnpndtvtfsfng
afiapdrasflrgksmgiqsgvqvdadcegdcyhsggtiisklpfqnidsravgkcpryv
kqrslllatgmknvpeipkgr