PDB entry 6d64

View 6d64 on RCSB PDB site
Description: Crystal Structure of Human CD1b in Complex with POPC
Class: immune system
Keywords: BC8B, CD1, CD1b, PC, POPC, phosphatidylcholine, IMMUNE SYSTEM
Deposited on 2018-04-20, released 2019-01-16
The last revision prior to the SCOPe 2.07 freeze date was dated 2019-01-16, with a file datestamp of 2019-01-11.
Experiment type: XRAY
Resolution: 1.7 Å
R-factor: N/A
AEROSPACI score: 0.4 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: T-cell surface glycoprotein cd1b
    Species: Homo sapiens [TaxId:9606]
    Gene: CD1B
    Database cross-references and differences (RAF-indexed):
    • Uniprot P29016 (Start-276)
      • expression tag (277-283)
    Domains in SCOPe 2.07: d6d64a1, d6d64a2, d6d64a3
  • Chain 'B':
    Compound: Beta-2-microglobulin
    Species: Homo sapiens [TaxId:9606]
    Gene: B2M, CDABP0092, HDCMA22P
    Database cross-references and differences (RAF-indexed):
    • Uniprot P61769 (2-End)
      • expression tag (0-1)
    Domains in SCOPe 2.07: d6d64b1, d6d64b2
  • Heterogens: NAG, FUC, BMA, MAN, POV, CUY, CL, EDO, NA, IOD, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download)
    >6d64A (A:)
    hafqgptsfhviqtssftnstwaqtqgsgwlddlqihgwdsdsgtaiflkpwskgnfsdk
    evaeleeifrvyifgfarevqdfagdfqmkypfeiqgiagcelhsggaivsflrgalggl
    dflsvknascvpspeggsraqkfcaliiqyqgimetvrillyetcpryllgvlnagkadl
    qrqvkpeawlssgpspgpgrlqlvchvsgfypkpvwvmwmrgeqeqqgtqlgdilpnanw
    twylratldvadgeaaglscrvkhsslegqdiilywrgsglndifeaqkiewhehhhhhh
    

    Sequence, based on observed residues (ATOM records): (download)
    >6d64A (A:)
    fqgptsfhviqtssftnstwaqtqgsgwlddlqihgwdsdsgtaiflkpwskgnfsdkev
    aeleeifrvyifgfarevqdfagdfqmkypfeiqgiagcelhsggaivsflrgalggldf
    lsvknascvpspeggsraqkfcaliiqyqgimetvrillyetcpryllgvlnagkadlqr
    qvkpeawlssgpspgpgrlqlvchvsgfypkpvwvmwmrgeqeqqgtqlgdilpnanwtw
    ylratldvadgeaaglscrvkhsslegqdiilywrgsglndi
    

  • Chain 'B':
    Sequence, based on SEQRES records: (download)
    >6d64B (B:)
    pkiqrtpkiqvysrhpaengksnflncyvsgfhpsdievdllkngeriekvehsdlsfsk
    dwsfyllyyteftptekdeyacrvnhvtlsqpkivkwdrdm
    

    Sequence, based on observed residues (ATOM records): (download)
    >6d64B (B:)
    pkiqrtpkiqvysrhpaengksnflncyvsgfhpsdievdllkngeriekvehsdlsfsk
    dwsfyllyyteftptekdeyacrvnhvtlsqpkivkwdrd