PDB entry 6d46
View 6d46 on RCSB PDB site
Description: Crystal structure of a DNA polymerase III subunit beta DnaN sliding clamp from Rickettsia typhi str. Wilmington
Class: DNA binding protein
Keywords: structural genomics, NIAID, National Institute of Allergy and Infectious Diseases, DNA binding, polymerase, DnaN, griselimycin, Seattle Structural Genomics Center for Infectious Disease, SSGCID, DNA BINDING PROTEIN
Deposited on
2018-04-17, released
2018-05-02
The last revision prior to the SCOPe 2.08 freeze date was dated
2021-01-06, with a file datestamp of
2021-01-01.
Experiment type: XRAY
Resolution: 2 Å
R-factor: N/A
AEROSPACI score: 0.39
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: Beta sliding clamp
Species: Rickettsia typhi (strain ATCC VR-144 / Wilmington) [TaxId:257363]
Gene: dnaN, RT0405
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d6d46a1, d6d46a2, d6d46a3, d6d46a4 - Heterogens: PG4, CL, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>6d46A (A:)
mahhhhhhmlklivetktlvqslgfarsvvekrnvipeyaniklsakdgnlelsstnmdl
ylsqkiavqvlsegeitvstqtlsdivrklpdseltlteldimkleikgqncqfnlftlp
vssfpamdsikpevsfkiscadfakiiestkfsisldetrynlngiylhikdkeffaast
dghrlsiswitleekiknfgvilpqksaeeilkivkdlknihedieillssnkikficne
ntillsklidgtfpdysafipkssisklvinrkifadsieriaiitvekfraiklslsrk
tleisavgeargnakeiitasqdkesfyeyncdeslvigfnpqyledvlkavksnlvely
fsdisasapvlikfpqnpkdifvimpvkv
Sequence, based on observed residues (ATOM records): (download)
>6d46A (A:)
hmlklivetktlvqslgfarsvvipeyaniklsakdgnlelsstnmdlylsqkiavqvls
egeitvstqtlsdivrklpdseltlteldimkleikgqncqfnlftlpvssfpamdsikp
evsfkiscadfakiiestkfsisldetrynlngiylhikdkeffaastdghrlsiswitl
eekiknfgvilpqksaeeilkivkdlknihedieillssnkikficnentillsklidgt
fpdysafipkssisklvinrkifadsieriaiitvekfraiklslsrktleisavgearg
nakeiitasqdkesfyeyncdeslvigfnpqyledvlkavksnlvelyfsdisasapvli
kfpqnpkdifvimpvkv