PDB entry 6ca8

View 6ca8 on RCSB PDB site
Description: Crystal structure of Plasmodium falciparum topoisomerase II DNA-binding, cleavage and re-ligation domain
Class: isomerase
Keywords: Topoisomerase, DNA-binding domain, ISOMERASE
Deposited on 2018-01-29, released 2019-02-06
The last revision prior to the SCOPe 2.08 freeze date was dated 2019-12-18, with a file datestamp of 2019-12-13.
Experiment type: XRAY
Resolution: 2.33 Å
R-factor: N/A
AEROSPACI score: 0.24 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: DNA topoisomerase 2
    Species: Plasmodium falciparum [TaxId:5833]
    Gene: TopoII
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6ca8a_
  • Heterogens: HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >6ca8A (A:)
mareriigipkledandagskysqectliltegdsaktsclaglsivgrdkygvfplkgk
llnvrdasfkqlmdnkeiqnifrimglditdknkddikglrygslmimtdqdydgshikg
llinmihkfwpsllkhkgflsefvtpivkvqkgsqeysfftiaeyeqwkentnllgwkik
yykglgtstdrefkqyfsdiknhkimflwtgdrdgdsidmafskkriedrklwlqnfilg
syvdhkekdlsyydfvnkeliyysrydtersipnimdgwkpgqrkvlygcfkrnlrneck
vaqlvgyiaehsayhhgesslqqtiinmaqtfvgsnninflepcgqfgsrkeggkdasaa
ryiftklasstrsifneyddpilkylneegqkiepqyyipviptilvngcegigtgyssf
ipnynykdiidnikryinkeplipmvpwykdfkgriesngktgyetigiinkidndtlei
telpikkwtqdykefleelltdekhqlildyidnsshedicftikmdpaklqkaeeegle
kvfklkstltttnmtlfdpnlklqrysteldilkefcyqrlkayenrksylisklekekr
iisnktkfilaivnnelivnkkkkkvlveelyrkgydpykdinkikkeeifeqelldaad
npedneeiiagitvkdydyllsmpifsltlekvedlltqlkekereleilrnitvetmwl
kdiekveeaiefqrnvelsnreesnhhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >6ca8A (A:)
reriigipkledandagskysqectliltegdsaktsclaglsivgrdkygvfplkgkll
nvrdasfkqlmdnkeiqnifrimglditdknkddikglrygslmimtdqdydgshikgll
inmihkfwpsllkhkgflsefvtpivkvqkgsqeysfftiaeyeqwkentnllgwkikyy
kglgtstdrefkqyfsdiknhkimflwtgdrdgdsidmafskkriedrklwlqnfilgsy
vdhkekdlsyydfvnkeliyysrydtersipnimdgwkpgqrkvlygcfkrnlrneckva
qlvgyiaehsayhhgesslqqtiinmaqtfvgsnninflepcgqfgsrkeggkdasaary
iftklasstrsifneyddpilkylneegqkiepqyyipviptilvngcegigtgyssfip
nynykdiidnikryinkeplipmvpwykdfkgriesngktgyetigiinkidndtleite
lpikkwtqdykefleelltdekhqlildyidnsshedicftikmdpaklqkaeeeglekv
fklkstltttnmtlfdpnlklqrysteldilkefcyqrlkayenrksylisklekekrii
snktkfilaivnnelivnkkkkkvlveelyrkgydpykdinkeeifeqeledneeiiagi
tvkdydyllsmpifsltlekvedlltqlkekereleilrnitvetmwlkdiekveeaief
qrnvelsnree