PDB entry 6b1l

View 6b1l on RCSB PDB site
Description: Crystal structure of glycylpeptide N-tetradecanoyltransferase from Plasmodium vivax in complex with inhibitor IMP-0001173
Class: transferase
Keywords: SSGCID, glycylpeptide N-tetradecanoyltransferase, N-myristoyltransferase, NMT, Plasmodium vivax, Salvador I, Structural Genomics, Seattle Structural Genomics Center for Infectious Disease, TRANSFERASE
Deposited on 2017-09-18, released 2018-09-26
The last revision prior to the SCOPe 2.08 freeze date was dated 2018-09-26, with a file datestamp of 2018-09-21.
Experiment type: XRAY
Resolution: 2.3 Å
R-factor: N/A
AEROSPACI score: 0.24 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Glycylpeptide N-tetradecanoyltransferase
    Species: Plasmodium vivax (strain Salvador I) [TaxId:126793]
    Gene: PVX_085815
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6b1la1, d6b1la2
  • Chain 'B':
    Compound: Glycylpeptide N-tetradecanoyltransferase
    Species: Plasmodium vivax (strain Salvador I) [TaxId:126793]
    Gene: PVX_085815
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6b1lb1
  • Heterogens: CJ4, MYA, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >6b1lA (A:)
mgsshhhhhhsaalevlfqgpdykfwytqpvpkindefnesvnepfisdnkvedvrkdey
klppgyswyvcdvkdekdrseiytlltdnyvedddnifrfnysaefllwaltspnylktw
higvkydasnkligfisaiptdicihkrtikmaevnflcvhktlrskrlapvlikeitrr
inleniwqaiytagvylpkpvsdaryyhrsinvkklieigfsslnsrltmsraiklyrve
dtlniknmrlmkkkdvegvhkllgsyleqfnlyavftkeeiahwflpienviytyvneen
gkikdmisfyslpsqilgndkystlnaaysfynvtttatfkqlmqdaillakrnnfdvfn
alevmqnksvfedlkfgegdgslkyylynwkcasfapahvgivll

    Sequence, based on observed residues (ATOM records): (download) 
    >6b1lA (A:)
dykfwytqpvpkindefnesvnepfisdnkvedvrkdeyklppgyswyvcdvkdekdrse
iytlltdnyvedddnifrfnysaefllwaltspnylktwhigvkydasnkligfisaipt
dicihkrtikmaevnflcvhktlrskrlapvlikeitrrinleniwqaiytagvylpkpv
sdaryyhrsinvkklieigfstmsraiklyrvedtlniknmrlmkkkdvegvhkllgsyl
eqfnlyavftkeeiahwflpienviytyvneengkikdmisfyslpsqilgndkystlna
aysfynvtttatfkqlmqdaillakrnnfdvfnalevmqnksvfedlkfgegdgslkyyl
ynwkcasfapahvgivll

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >6b1lB (B:)
mgsshhhhhhsaalevlfqgpdykfwytqpvpkindefnesvnepfisdnkvedvrkdey
klppgyswyvcdvkdekdrseiytlltdnyvedddnifrfnysaefllwaltspnylktw
higvkydasnkligfisaiptdicihkrtikmaevnflcvhktlrskrlapvlikeitrr
inleniwqaiytagvylpkpvsdaryyhrsinvkklieigfsslnsrltmsraiklyrve
dtlniknmrlmkkkdvegvhkllgsyleqfnlyavftkeeiahwflpienviytyvneen
gkikdmisfyslpsqilgndkystlnaaysfynvtttatfkqlmqdaillakrnnfdvfn
alevmqnksvfedlkfgegdgslkyylynwkcasfapahvgivll

    Sequence, based on observed residues (ATOM records): (download) 
    >6b1lB (B:)
dykfwytqpvpkindefnesvnepfisdnkvedvrkdeycdvkdekdrseiytlltdnyr
fnysaefllwaltspnylktwhiisaiptdicihkrtikmaevnfllapvlikeitrrin
leniwqaiytagvylpkpvsdaryyhrkklieyrvedtlnnmrlmkkkdvegvhkllgsy
leqfnlyavftkeeiahwflpienviytyvneengkikdmisfyslpsqildkystlnaa
ysfynvtttatfkqlmqdaillakrnnffnalevmqnksvfedlkfgegdgslkyylynw
kcasfapahvgivll