PDB entry 5zli

View 5zli on RCSB PDB site
Description: Crystal structure of glutamine synthetase from helicobacter pylori
Class: ligase
Keywords: glutamine synthetase, enzyme, GS, helicobacter pylori, STRUCTURAL PROTEIN, LIGASE
Deposited on 2018-03-28, released 2018-08-29
The last revision prior to the SCOPe 2.08 freeze date was dated 2018-08-29, with a file datestamp of 2018-08-24.
Experiment type: XRAY
Resolution: 2.8 Å
R-factor: N/A
AEROSPACI score: 0.16 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: glutamine synthetase
    Species: Helicobacter pylori (strain ATCC 700392 / 26695) [TaxId:85962]
    Gene: glnA, HP_0512
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d5zlia1, d5zlia2
  • Chain 'B':
    Compound: glutamine synthetase
    Species: Helicobacter pylori (strain ATCC 700392 / 26695) [TaxId:85962]
    Gene: glnA, HP_0512
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d5zlib1, d5zlib2
  • Chain 'C':
    Compound: glutamine synthetase
    Species: Helicobacter pylori (strain ATCC 700392 / 26695) [TaxId:85962]
    Gene: glnA, HP_0512
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d5zlic1, d5zlic2
  • Chain 'D':
    Compound: glutamine synthetase
    Species: Helicobacter pylori (strain ATCC 700392 / 26695) [TaxId:85962]
    Gene: glnA, HP_0512
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d5zlid1, d5zlid2
  • Chain 'E':
    Compound: glutamine synthetase
    Species: Helicobacter pylori (strain ATCC 700392 / 26695) [TaxId:85962]
    Gene: glnA, HP_0512
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d5zlie1, d5zlie2
  • Chain 'F':
    Compound: glutamine synthetase
    Species: Helicobacter pylori (strain ATCC 700392 / 26695) [TaxId:85962]
    Gene: glnA, HP_0512
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d5zlif1, d5zlif2

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >5zliA (A:)
mivrtqnseskikeffefckenevefvdfrfsdikgtwnhiaysfgalthgmlkegipfd
ascfkgwqgiehsdmiltpdlvryfidpfsadvsvvvfcdvydvyknqpyekcprsiakk
alqhlkdsglgdvayfgaeneffifdsikikdasnsqyyevdseegewnrdrsfengvnf
ghrpgkqggympvpptdtmmdirteivkvlnqvgletfvvhhevaqaqgevgvkfgdlve
aadnvqklkyvvkmvahlngktatfmpkplygdngsgmhthvsvwknnenlfsgetykgl
sefalhflggvlrharglaaftnastnsykrlipgyeapsiltysannrsasvripygis
knsarfefrfpdsssnpylafaailmagmdgvknkidpgeamdinlfkltldeirekgik
qmphtlrrsleemladkqylkesqvfseefiqayqslkfnaevfpweskphpfefittys
c

    Sequence, based on observed residues (ATOM records): (download) 
    >5zliA (A:)
seskikeffefckenevefvdfrfsdikgtwnhiaysfgalthgmlkegipfdascfkgw
qgiehsdmiltpdlvryfidpfsadvsvvvfcdvydvyknqpyekcprsiakkalqhlkd
sglgdvayfgaeneffifdsikikdasnsqyyevdseegewnrdrsfengvnfghrpgkq
ggympvpptdtmmdirteivkvlnqvgletfvvhhevaqaqgevgvkfgdlveaadnvqk
lkyvvkmvahlngktatfmpkplygdngsgmhthvsvwknnenlfsgetykglsefalhf
lggvlrharglaaftnastnsykrlipgyeapsiltysannrsasvripygisknsarfe
frfpdsssnpylafaailmagmdgvknkidpgeamdinlfkltldeirekgikqmphtlr
rsleemladkqylkesqvfseefiqayqslkfnaevfpweskphpfefittysc

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >5zliB (B:)
mivrtqnseskikeffefckenevefvdfrfsdikgtwnhiaysfgalthgmlkegipfd
ascfkgwqgiehsdmiltpdlvryfidpfsadvsvvvfcdvydvyknqpyekcprsiakk
alqhlkdsglgdvayfgaeneffifdsikikdasnsqyyevdseegewnrdrsfengvnf
ghrpgkqggympvpptdtmmdirteivkvlnqvgletfvvhhevaqaqgevgvkfgdlve
aadnvqklkyvvkmvahlngktatfmpkplygdngsgmhthvsvwknnenlfsgetykgl
sefalhflggvlrharglaaftnastnsykrlipgyeapsiltysannrsasvripygis
knsarfefrfpdsssnpylafaailmagmdgvknkidpgeamdinlfkltldeirekgik
qmphtlrrsleemladkqylkesqvfseefiqayqslkfnaevfpweskphpfefittys
c

    Sequence, based on observed residues (ATOM records): (download) 
    >5zliB (B:)
nseskikeffefckenevefvdfrfsdikgtwnhiaysfgalthgmlkegipfdascfkg
wqgiehsdmiltpdlvryfidpfsadvsvvvfcdvydvyknqpyekcprsiakkalqhlk
dsglgdvayfgaeneffifdsikikdasnsqyyevdseegewnrdrsfengvnfghrpgk
qggympvpptdtmmdirteivkvlnqvgletfvvhhevaqaqgevgvkfgdlveaadnvq
klkyvvkmvahlngktatfmpkplygdngsgmhthvsvwknnenlfsgetykglsefalh
flggvlrharglaaftnastnsykrlipgyeapsiltysannrsasvripygisknsarf
efrfpdsssnpylafaailmagmdgvknkidpgeamdinlfkltldeirekgikqmphtl
rrsleemladkqylkesqvfseefiqayqslkfnaevfpweskphpfefittysc

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >5zliC (C:)
mivrtqnseskikeffefckenevefvdfrfsdikgtwnhiaysfgalthgmlkegipfd
ascfkgwqgiehsdmiltpdlvryfidpfsadvsvvvfcdvydvyknqpyekcprsiakk
alqhlkdsglgdvayfgaeneffifdsikikdasnsqyyevdseegewnrdrsfengvnf
ghrpgkqggympvpptdtmmdirteivkvlnqvgletfvvhhevaqaqgevgvkfgdlve
aadnvqklkyvvkmvahlngktatfmpkplygdngsgmhthvsvwknnenlfsgetykgl
sefalhflggvlrharglaaftnastnsykrlipgyeapsiltysannrsasvripygis
knsarfefrfpdsssnpylafaailmagmdgvknkidpgeamdinlfkltldeirekgik
qmphtlrrsleemladkqylkesqvfseefiqayqslkfnaevfpweskphpfefittys
c

    Sequence, based on observed residues (ATOM records): (download) 
    >5zliC (C:)
seskikeffefckenevefvdfrfsdikgtwnhiaysfgalthgmlkegipfdascfkgw
qgiehsdmiltpdlvryfidpfsadvsvvvfcdvydvyknqpyekcprsiakkalqhlkd
sglgdvayfgaeneffifdsikikdasnsqyyevdseegewnrdrsfengvnfghrpgkq
ggympvpptdtmmdirteivkvlnqvgletfvvhhevaqaqgevgvkfgdlveaadnvqk
lkyvvkmvahlngktatfmpkplygdngsgmhthvsvwknnenlfsgetykglsefalhf
lggvlrharglaaftnastnsykrlipgyeapsiltysannrsasvripygisknsarfe
frfpdsssnpylafaailmagmdgvknkidpgeamdinlfkltldeirekgikqmphtlr
rsleemladkqylkesqvfseefiqayqslkfnaevfpweskphpfefittysc

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >5zliD (D:)
mivrtqnseskikeffefckenevefvdfrfsdikgtwnhiaysfgalthgmlkegipfd
ascfkgwqgiehsdmiltpdlvryfidpfsadvsvvvfcdvydvyknqpyekcprsiakk
alqhlkdsglgdvayfgaeneffifdsikikdasnsqyyevdseegewnrdrsfengvnf
ghrpgkqggympvpptdtmmdirteivkvlnqvgletfvvhhevaqaqgevgvkfgdlve
aadnvqklkyvvkmvahlngktatfmpkplygdngsgmhthvsvwknnenlfsgetykgl
sefalhflggvlrharglaaftnastnsykrlipgyeapsiltysannrsasvripygis
knsarfefrfpdsssnpylafaailmagmdgvknkidpgeamdinlfkltldeirekgik
qmphtlrrsleemladkqylkesqvfseefiqayqslkfnaevfpweskphpfefittys
c

    Sequence, based on observed residues (ATOM records): (download) 
    >5zliD (D:)
nseskikeffefckenevefvdfrfsdikgtwnhiaysfgalthgmlkegipfdascfkg
wqgiehsdmiltpdlvryfidpfsadvsvvvfcdvydvyknqpyekcprsiakkalqhlk
dsglgdvayfgaeneffifdsikikdasnsqyyevdseegewnrdrsfengvnfghrpgk
qggympvpptdtmmdirteivkvlnqvgletfvvhhevaqaqgevgvkfgdlveaadnvq
klkyvvkmvahlngktatfmpkplygdngsgmhthvsvwknnenlfsgetykglsefalh
flggvlrharglaaftnastnsykrlipgyeapsiltysannrsasvripygisknsarf
efrfpdsssnpylafaailmagmdgvknkidpgeamdinlfkltldeirekgikqmphtl
rrsleemladkqylkesqvfseefiqayqslkfnaevfpweskphpfefittysc

  • Chain 'E':
    Sequence, based on SEQRES records: (download) 
    >5zliE (E:)
mivrtqnseskikeffefckenevefvdfrfsdikgtwnhiaysfgalthgmlkegipfd
ascfkgwqgiehsdmiltpdlvryfidpfsadvsvvvfcdvydvyknqpyekcprsiakk
alqhlkdsglgdvayfgaeneffifdsikikdasnsqyyevdseegewnrdrsfengvnf
ghrpgkqggympvpptdtmmdirteivkvlnqvgletfvvhhevaqaqgevgvkfgdlve
aadnvqklkyvvkmvahlngktatfmpkplygdngsgmhthvsvwknnenlfsgetykgl
sefalhflggvlrharglaaftnastnsykrlipgyeapsiltysannrsasvripygis
knsarfefrfpdsssnpylafaailmagmdgvknkidpgeamdinlfkltldeirekgik
qmphtlrrsleemladkqylkesqvfseefiqayqslkfnaevfpweskphpfefittys
c

    Sequence, based on observed residues (ATOM records): (download) 
    >5zliE (E:)
seskikeffefckenevefvdfrfsdikgtwnhiaysfgalthgmlkegipfdascfkgw
qgiehsdmiltpdlvryfidpfsadvsvvvfcdvydvyknqpyekcprsiakkalqhlkd
sglgdvayfgaeneffifdsikikdasnsqyyevdseegewnrdrsfengvnfghrpgkq
ggympvpptdtmmdirteivkvlnqvgletfvvhhevaqaqgevgvkfgdlveaadnvqk
lkyvvkmvahlngktatfmpkplygdngsgmhthvsvwknnenlfsgetykglsefalhf
lggvlrharglaaftnastnsykrlipgyeapsiltysannrsasvripygisknsarfe
frfpdsssnpylafaailmagmdgvknkidpgeamdinlfkltldeirekgikqmphtlr
rsleemladkqylkesqvfseefiqayqslkfnaevfpweskphpfefittysc

  • Chain 'F':
    Sequence, based on SEQRES records: (download) 
    >5zliF (F:)
mivrtqnseskikeffefckenevefvdfrfsdikgtwnhiaysfgalthgmlkegipfd
ascfkgwqgiehsdmiltpdlvryfidpfsadvsvvvfcdvydvyknqpyekcprsiakk
alqhlkdsglgdvayfgaeneffifdsikikdasnsqyyevdseegewnrdrsfengvnf
ghrpgkqggympvpptdtmmdirteivkvlnqvgletfvvhhevaqaqgevgvkfgdlve
aadnvqklkyvvkmvahlngktatfmpkplygdngsgmhthvsvwknnenlfsgetykgl
sefalhflggvlrharglaaftnastnsykrlipgyeapsiltysannrsasvripygis
knsarfefrfpdsssnpylafaailmagmdgvknkidpgeamdinlfkltldeirekgik
qmphtlrrsleemladkqylkesqvfseefiqayqslkfnaevfpweskphpfefittys
c

    Sequence, based on observed residues (ATOM records): (download) 
    >5zliF (F:)
seskikeffefckenevefvdfrfsdikgtwnhiaysfgalthgmlkegipfdascfkgw
qgiehsdmiltpdlvryfidpfsadvsvvvfcdvydvyknqpyekcprsiakkalqhlkd
sglgdvayfgaeneffifdsikikdasnsqyyevdseegewnrdrsfengvnfghrpgkq
ggympvpptdtmmdirteivkvlnqvgletfvvhhevaqaqgevgvkfgdlveaadnvqk
lkyvvkmvahlngktatfmpkplygdngsgmhthvsvwknnenlfsgetykglsefalhf
lggvlrharglaaftnastnsykrlipgyeapsiltysannrsasvripygisknsarfe
frfpdsssnpylafaailmagmdgvknkidpgeamdinlfkltldeirekgikqmphtlr
rsleemladkqylkesqvfseefiqayqslkfnaevfpweskphpfefittysc