PDB entry 5zk0
View 5zk0 on RCSB PDB site
Description: Crystal structure of Peptidyl-tRNA hydrolase mutant -M71A from Vibrio cholerae
Class: hydrolase
Keywords: Peptidyl-tRNA hydrolase, Mutant M71A, HYDROLASE
Deposited on
2018-03-22, released
2018-06-06
The last revision prior to the SCOPe 2.08 freeze date was dated
2018-06-20, with a file datestamp of
2018-06-15.
Experiment type: XRAY
Resolution: 2.55 Å
R-factor: N/A
AEROSPACI score: 0.19
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: Peptidyl-tRNA hydrolase
Species: Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961) [TaxId:243277]
Gene: pth, VC_2184
Database cross-references and differences (RAF-indexed):
- Uniprot Q9KQ21 (2-198)
- insertion (3)
- engineered mutation (72)
Domains in SCOPe 2.08: d5zk0a_ - Chain 'B':
Compound: Peptidyl-tRNA hydrolase
Species: Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961) [TaxId:243277]
Gene: pth, VC_2184
Database cross-references and differences (RAF-indexed):
- Uniprot Q9KQ21 (2-198)
- insertion (3)
- engineered mutation (72)
Domains in SCOPe 2.08: d5zk0b_ - Heterogens: NA, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>5zk0A (A:)
gamvsqpikllvglanpgpeyaktrhnagawvveelarihnvtlknepkffgltgrllin
sqelrvlipttfanlsgkaiaalanfyqikpeeimvahdeldlppgvakfkqggghgghn
glkdtisklgnnkefyrlrlgighpghkdkvagyvlgkapakeqexldaavdesvrclei
lmkdgltkaqnrlhtfkae
Sequence, based on observed residues (ATOM records): (download)
>5zk0A (A:)
mvsqpikllvglanpgpeyaktrhnagawvveelarihnvtlknepkffgltgrllinsq
elrvlipttfanlsgkaiaalanfyqikpeeimvahdeldlppgvakfkqggghgghngl
kdtisklgnnkefyrlrlgighpkvagyvlgkapakeqexldaavdesvrcleilmkdgl
tkaqnrlhtfkae
- Chain 'B':
Sequence, based on SEQRES records: (download)
>5zk0B (B:)
gamvsqpikllvglanpgpeyaktrhnagawvveelarihnvtlknepkffgltgrllin
sqelrvlipttfanlsgkaiaalanfyqikpeeimvahdeldlppgvakfkqggghgghn
glkdtisklgnnkefyrlrlgighpghkdkvagyvlgkapakeqexldaavdesvrclei
lmkdgltkaqnrlhtfkae
Sequence, based on observed residues (ATOM records): (download)
>5zk0B (B:)
mvsqpikllvglanpgpeyaktrhnagawvveelarihnvtlknepkffgltgrllinsq
elrvlipttfanlsgkaiaalanfyqikpeeimvahdeldlppgvakfkqggghgghngl
kdtisklgnnkefyrlrlgighpghkdkvagyvlgkapakeqexldaavdesvrcleilm
kdgltkaqnrlhtfkae