PDB entry 5zbn

View 5zbn on RCSB PDB site
Description: Structure of glycolate oxidase without FMN from Nicotiana benthamiana
Class: oxidoreductase
Keywords: enzyme kinetics, SAXS, oligomerization, OXIDOREDUCTASE
Deposited on 2018-02-12, released 2018-12-26
The last revision prior to the SCOPe 2.08 freeze date was dated 2020-07-08, with a file datestamp of 2020-07-03.
Experiment type: XRAY
Resolution: 2.32 Å
R-factor: N/A
AEROSPACI score: 0.24 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: glycolate oxidase
    Species: Nicotiana benthamiana [TaxId:4100]
    Gene: gox
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d5zbna_
  • Chain 'B':
    Compound: glycolate oxidase
    Species: Nicotiana benthamiana [TaxId:4100]
    Gene: gox
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d5zbnb_
  • Chain 'C':
    Compound: glycolate oxidase
    Species: Nicotiana benthamiana [TaxId:4100]
    Gene: gox
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d5zbnc_
  • Heterogens: PO4, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >5zbnA (A:)
meevtnvmeyeaiakkklpkmvfdyyasgaedqwtlaenrnafsrilfrprilidvskid
msttvlgfkismpimiaptamqkmahpegeyataraasaagtimtlsswatssveevast
gpgirffqlyvykdrnvvaqlvrraeragfkaialtvdtprlgrreadiknrfvlppflt
lknfegldlgkmdqasdsglasyvagqidrtlswkdvqwlqtitslpilvkgvltaedar
lavqagaagiivsnhgarqldyvpstimaleevvkaaqgripvfldggvrrgtdvfkala
lgasgifigrpvvfslaaegeagikkvlqmlrdefeltmalsgcrslneitrnhivtewd
apraalpaprl

    Sequence, based on observed residues (ATOM records): (download) 
    >5zbnA (A:)
eevtnvmeyeaiakkklpkmvfdyyasgaedqwtlaenrnafsrilfrprilidvskidm
sttvlgfkismpimiaptamqkmahpegeyataraasaagtimtlsswatssveevastg
pgirffqlyvykdrnvvaqlvrraeragfkaialtvdtprliknrfvlppfltlknfegl
dlgkdsglasyvagqidrtlswkdvqwlqtitslpilvkgvltaedarlavqagaagiiv
snhgarqldyvpstimaleevvkaaqgripvfldggvrrgtdvfkalalgasgifigrpv
vfslaaegeagikkvlqmlrdefeltmalsgcrslneitrnhivtewdapraalpaprl

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >5zbnB (B:)
meevtnvmeyeaiakkklpkmvfdyyasgaedqwtlaenrnafsrilfrprilidvskid
msttvlgfkismpimiaptamqkmahpegeyataraasaagtimtlsswatssveevast
gpgirffqlyvykdrnvvaqlvrraeragfkaialtvdtprlgrreadiknrfvlppflt
lknfegldlgkmdqasdsglasyvagqidrtlswkdvqwlqtitslpilvkgvltaedar
lavqagaagiivsnhgarqldyvpstimaleevvkaaqgripvfldggvrrgtdvfkala
lgasgifigrpvvfslaaegeagikkvlqmlrdefeltmalsgcrslneitrnhivtewd
apraalpaprl

    Sequence, based on observed residues (ATOM records): (download) 
    >5zbnB (B:)
evtnvmeyeaiakkklpkmvfdyyasgaedqwtlaenrnafsrilfrprilidvskidms
ttvlgfkismpimiaptamqkmahpegeyataraasaagtimtlsswatssveevastgp
girffqlyvykdrnvvaqlvrraeragfkaialtvdtknrfvlppfltlknfegldlgsg
lasyvagqidrtlswkdvqwlqtitslpilvkgvltaedarlavqagaagiivsnhgarq
ldyvpstimaleevvkaaqgripvfldggvrrgtdvfkalalgasgifigrpvvfslaae
geagikkvlqmlrdefeltmalsgcrslneitrnhivtewdapraal

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >5zbnC (C:)
meevtnvmeyeaiakkklpkmvfdyyasgaedqwtlaenrnafsrilfrprilidvskid
msttvlgfkismpimiaptamqkmahpegeyataraasaagtimtlsswatssveevast
gpgirffqlyvykdrnvvaqlvrraeragfkaialtvdtprlgrreadiknrfvlppflt
lknfegldlgkmdqasdsglasyvagqidrtlswkdvqwlqtitslpilvkgvltaedar
lavqagaagiivsnhgarqldyvpstimaleevvkaaqgripvfldggvrrgtdvfkala
lgasgifigrpvvfslaaegeagikkvlqmlrdefeltmalsgcrslneitrnhivtewd
apraalpaprl

    Sequence, based on observed residues (ATOM records): (download) 
    >5zbnC (C:)
vtnvmeyeaiakkklpkmvfdyyasgaedqwtlaenrnafsrilfrprilidvskidmst
tvlgfkismpimiaptamqkmahpegeyataraasaagtimtlsswatssveevastgpg
irffqlyvykdrnvvaqlvrraeragfkaialtvdtprlvlppfltlknfeglasyvagq
idrtlswkdvqwlqtitslpilvkgvltaedarlavqagaagiivsnhgarqldyvpsti
maleevvkaaqgripvfldggvrrgtdvfkalalgasgifigrpvvfslaaegeagikkv
lqmlrdefeltmalsgcrslneitrnhivtewd