PDB entry 5zbm

View 5zbm on RCSB PDB site
Description: Structure of glycolate oxidase containing FMN from Nicotiana benthamiana
Class: oxidoreductase
Keywords: enzyme kinetics, SAXS, oligomerization, OXIDOREDUCTASE
Deposited on 2018-02-12, released 2018-12-26
The last revision prior to the SCOPe 2.07 freeze date was dated 2018-12-26, with a file datestamp of 2018-12-21.
Experiment type: XRAY
Resolution: 2.8 Å
R-factor: N/A
AEROSPACI score: 0.17 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: glycolate oxidase
    Species: Nicotiana benthamiana [TaxId:4100]
    Gene: gox
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d5zbma_
  • Chain 'B':
    Compound: glycolate oxidase
    Species: Nicotiana benthamiana [TaxId:4100]
    Gene: gox
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d5zbmb_
  • Heterogens: FMN, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download)
    >5zbmA (A:)
    meevtnvmeyeaiakkklpkmvfdyyasgaedqwtlaenrnafsrilfrprilidvskid
    msttvlgfkismpimiaptamqkmahpegeyataraasaagtimtlsswatssveevast
    gpgirffqlyvykdrnvvaqlvrraeragfkaialtvdtprlgrreadiknrfvlppflt
    lknfegldlgkmdqasdsglasyvagqidrtlswkdvqwlqtitslpilvkgvltaedar
    lavqagaagiivsnhgarqldyvpstimaleevvkaaqgripvfldggvrrgtdvfkala
    lgasgifigrpvvfslaaegeagikkvlqmlrdefeltmalsgcrslneitrnhivtewd
    apraalpaprl
    

    Sequence, based on observed residues (ATOM records): (download)
    >5zbmA (A:)
    evtnvmeyeaiakkklpkmvfdyyasgaedqwtlaenrnafsrilfrprilidvskidms
    ttvlgfkismpimiaptamqkmahpegeyataraasaagtimtlsswatssveevastgp
    girffqlyvykdrnvvaqlvrraeragfkaialtvdtprlgrreadiknrfvlppfltlk
    nfegldlgkglasyvagqidrtlswkdvqwlqtitslpilvkgvltaedarlavqagaag
    iivsnhgarqldyvpstimaleevvkaaqgripvfldggvrrgtdvfkalalgasgifig
    rpvvfslaaegeagikkvlqmlrdefeltmalsgcrslneitrnhivtewd
    

  • Chain 'B':
    Sequence, based on SEQRES records: (download)
    >5zbmB (B:)
    meevtnvmeyeaiakkklpkmvfdyyasgaedqwtlaenrnafsrilfrprilidvskid
    msttvlgfkismpimiaptamqkmahpegeyataraasaagtimtlsswatssveevast
    gpgirffqlyvykdrnvvaqlvrraeragfkaialtvdtprlgrreadiknrfvlppflt
    lknfegldlgkmdqasdsglasyvagqidrtlswkdvqwlqtitslpilvkgvltaedar
    lavqagaagiivsnhgarqldyvpstimaleevvkaaqgripvfldggvrrgtdvfkala
    lgasgifigrpvvfslaaegeagikkvlqmlrdefeltmalsgcrslneitrnhivtewd
    apraalpaprl
    

    Sequence, based on observed residues (ATOM records): (download)
    >5zbmB (B:)
    evtnvmeyeaiakkklpkmvfdyyasgaedqwtlaenrnafsrilfrprilidvskidms
    ttvlgfkismpimiaptamqkmahpegeyataraasaagtimtlsswatssveevastgp
    girffqlyvykdrnvvaqlvrraeragfkaialtvdtprlgrreadiknrfvlppfltlk
    nfegldlgkdsglasyvagqidrtlswkdvqwlqtitslpilvkgvltaedarlavqaga
    agiivsnhgarqldyvpstimaleevvkaaqgripvfldggvrrgtdvfkalalgasgif
    igrpvvfslaaegeagikkvlqmlrdefeltmalsgcrslneitrnhivtewd