PDB entry 5z5i

View 5z5i on RCSB PDB site
Description: Crystal structure of a thermostable glycoside hydrolase family 43 {beta}-1,4-xylosidase from Geobacillus thermoleovorans IT-08 in complex with L-arabinose and D-xylose
Class: hydrolase
Keywords: Xylanolytic, GH43, oligosaccharide, saccharification, HYDROLASE
Deposited on 2018-01-18, released 2018-04-25
The last revision prior to the SCOPe 2.08 freeze date was dated 2020-07-29, with a file datestamp of 2020-07-02.
Experiment type: XRAY
Resolution: 1.7 Å
R-factor: N/A
AEROSPACI score: 0.48 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: beta-xylosidase
    Species: Geobacillus thermoleovorans [TaxId:33941]
    Gene: xyl
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d5z5ia1, d5z5ia2
  • Heterogens: CA, FUB, XYS, XYP, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download)
    >5z5iA (A:)
    meysnpvikgfypdpsicrvgsdyylvtssfqyfpgvpifhstnlinwnkigyclirpsq
    lmlnnatnrsgifaptlryhegifylittnvtlkknfivmsedlqgewsepiwidgwggi
    dpslffdndgkvyitgtndnargeelgiyqaeidlkkgsiigerkliwkgtggsypeaph
    lykvngwyylliaeggteyghmvtvarskypfgpfescpfnpilthrstnhplqaighad
    ivqyhdgswwavfhgtrpisyppkhhlgretclapikwtddgwpiigyngridikmdagy
    lpvkeknigdeiieddfnsdifstdwnfiqnprlehyslkgrpswlkmrgtektlndins
    ptfigrrqehfvcnvstllefkpnqdneeagltvymnekhhyeialtkkngrinvvlkkt
    vgdiqvvvnsleyfsntiifsiqanpeeykfsfvdpntgqtyllgtglttllstevaggf
    tgvyfglyatgngkvctapaffdwfkyipeikgelnsklegkpipnpllgldstrtghhh
    hhh
    

    Sequence, based on observed residues (ATOM records): (download)
    >5z5iA (A:)
    meysnpvikgfypdpsicrvgsdyylvtssfqyfpgvpifhstnlinwnkigyclirpsq
    lmlnnatnrsgifaptlryhegifylittnvtlkknfivmsedlqgewsepiwidgwggi
    dpslffdndgkvyitgtndnargeelgiyqaeidlkkgsiigerkliwkgtggsypeaph
    lykvngwyylliaeggteyghmvtvarskypfgpfescpfnpilthrstnhplqaighad
    ivqyhdgswwavfhgtrpisyppkhhlgretclapikwtddgwpiigyngridikmdagy
    lpvkeiieddfnsdifstdwnfiqnprlehyslkgrpswlkmrgtektlndinsptfigr
    rqehfvcnvstllefkpnqdneeagltvymnekhhyeialtkkngrinvvlkktvgdiqv
    vvnsleyfsntiifsiqanpeeykfsfvdpntgqtyllgtglttllstevaggftgvyfg
    lyatgngkvctapaffdwfkyipe