PDB entry 5z47
View 5z47 on RCSB PDB site
Description: Crystal structure of pyrrolidone carboxylate peptidase I with disordered loop A from Deinococcus radiodurans R1
Class: hydrolase
Keywords: omega peptidase, pyroglutamate, exopeptidase, HYDROLASE
Deposited on
2018-01-10, released
2019-01-16
The last revision prior to the SCOPe 2.08 freeze date was dated
2019-04-24, with a file datestamp of
2019-04-19.
Experiment type: XRAY
Resolution: 1.7 Å
R-factor: N/A
AEROSPACI score: 0.4
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: Pyrrolidone-carboxylate peptidase
Species: Deinococcus radiodurans R1 [TaxId:243230]
Gene: pcp, DR_0490
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d5z47a1, d5z47a2 - Chain 'B':
Compound: Pyrrolidone-carboxylate peptidase
Species: Deinococcus radiodurans R1 [TaxId:243230]
Gene: pcp, DR_0490
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d5z47b1, d5z47b2 - Heterogens: DMS, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>5z47A (A:)
gsmptllltgfepfhthpdnpsaqaaqelhglelpggwgvhsallpvephaagaaltrll
seqdpgavlltglaagrpqvtlervgvgvmdfqipdnagqtyrdqpiepdapaaylatlp
lrailaawreaeipgdisnsaglyvcnfvlyhalhwlrehgrgavpcgflhvpanaaval
avpadrpplpylpqseitravrvaaeaitaqssvlqmgkm
Sequence, based on observed residues (ATOM records): (download)
>5z47A (A:)
gsmptllltgfeppdnpsaqaaqelhglelpggwgvhsallpvephaagaaltrllseqd
pgavlltglaagrpqvtlervgvgvmdfqipdnagqtyrdqpiepdapaaylatlplrai
laawreaeipgdisnsaglyvcnfvlyhalhwlrehgrgavpcgflhvpanaavalavpa
drpplpylpqseitravrvaaeaitaqs
- Chain 'B':
Sequence, based on SEQRES records: (download)
>5z47B (B:)
gsmptllltgfepfhthpdnpsaqaaqelhglelpggwgvhsallpvephaagaaltrll
seqdpgavlltglaagrpqvtlervgvgvmdfqipdnagqtyrdqpiepdapaaylatlp
lrailaawreaeipgdisnsaglyvcnfvlyhalhwlrehgrgavpcgflhvpanaaval
avpadrpplpylpqseitravrvaaeaitaqssvlqmgkm
Sequence, based on observed residues (ATOM records): (download)
>5z47B (B:)
smptllltgfeppdnpsaqaaqelhglelpggwgvhsallpvephaagaaltrllseqdp
gavlltglaagrpqvtlervgvgvmdfqipdnagqtyrdqpiepdapaaylatlplrail
aawreaeipgdisnsaglyvcnfvlyhalhwlrehgrgavpcgflhvpanaavalavpad
rpplpylpqseitravrvaaeaitaqs