PDB entry 5xop

View 5xop on RCSB PDB site
Description: Crystal Structure of N-terminal domain EhCaBP1 EF-2 mutant
Class: metal binding protein
Keywords: CaBP1, EF-HAND, CALCIUM BINDING, METAL BINDING PROTEIN
Deposited on 2017-05-30, released 2017-12-06
The last revision prior to the SCOPe 2.08 freeze date was dated 2017-12-06, with a file datestamp of 2017-12-01.
Experiment type: XRAY
Resolution: 1.9 Å
R-factor: N/A
AEROSPACI score: 0.35 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Calcium-binding protein 1 (EhCBP1), putative
    Species: Entamoeba histolytica HM-1:IMSS-B [TaxId:885319]
    Gene: EHI8A_025670
    Database cross-references and differences (RAF-indexed):
    • Uniprot M3TKH6 (0-64)
      • engineered mutation (46)
      • engineered mutation (49)
      • engineered mutation (51)
      • engineered mutation (54-55)
      • expression tag (65)
    Domains in SCOPe 2.08: d5xopa1, d5xopa2
  • Chain 'B':
    Compound: Calcium-binding protein 1 (EhCBP1), putative
    Species: Entamoeba histolytica HM-1:IMSS-B [TaxId:885319]
    Gene: EHI8A_025670
    Database cross-references and differences (RAF-indexed):
    • Uniprot M3TKH6 (0-64)
      • engineered mutation (46)
      • engineered mutation (49)
      • engineered mutation (51)
      • engineered mutation (54-55)
      • expression tag (65)
    Domains in SCOPe 2.08: d5xopb1, d5xopb2
  • Chain 'C':
    Compound: Calcium-binding protein 1 (EhCBP1), putative
    Species: Entamoeba histolytica HM-1:IMSS-B [TaxId:885319]
    Gene: EHI8A_025670
    Database cross-references and differences (RAF-indexed):
    • Uniprot M3TKH6 (0-64)
      • engineered mutation (46)
      • engineered mutation (49)
      • engineered mutation (51)
      • engineered mutation (54-55)
      • expression tag (65)
    Domains in SCOPe 2.08: d5xopc1, d5xopc2
  • Chain 'D':
    Compound: Calcium-binding protein 1 (EhCBP1), putative
    Species: Entamoeba histolytica HM-1:IMSS-B [TaxId:885319]
    Gene: EHI8A_025670
    Database cross-references and differences (RAF-indexed):
    • Uniprot M3TKH6 (0-64)
      • engineered mutation (46)
      • engineered mutation (49)
      • engineered mutation (51)
      • engineered mutation (54-55)
      • expression tag (65)
    Domains in SCOPe 2.08: d5xopd1, d5xopd2
  • Chain 'E':
    Compound: Calcium-binding protein 1 (EhCBP1), putative
    Species: Entamoeba histolytica HM-1:IMSS-B [TaxId:885319]
    Gene: EHI8A_025670
    Database cross-references and differences (RAF-indexed):
    • Uniprot M3TKH6 (0-64)
      • engineered mutation (46)
      • engineered mutation (49)
      • engineered mutation (51)
      • engineered mutation (54-55)
      • expression tag (65)
    Domains in SCOPe 2.08: d5xope1, d5xope2
  • Chain 'F':
    Compound: Calcium-binding protein 1 (EhCBP1), putative
    Species: Entamoeba histolytica HM-1:IMSS-B [TaxId:885319]
    Gene: EHI8A_025670
    Database cross-references and differences (RAF-indexed):
    • Uniprot M3TKH6 (0-64)
      • engineered mutation (46)
      • engineered mutation (49)
      • engineered mutation (51)
      • engineered mutation (54-55)
    Domains in SCOPe 2.08: d5xopf_
  • Heterogens: CA, MPD, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence; same for both SEQRES and ATOM records: (download)
    >5xopA (A:)
    maealfkeidvngdgavsyeevkafvskkraikneqllqlifksidkdgdgfidfeefak
    fygsia
    

  • Chain 'B':
    Sequence; same for both SEQRES and ATOM records: (download)
    >5xopB (B:)
    maealfkeidvngdgavsyeevkafvskkraikneqllqlifksidkdgdgfidfeefak
    fygsia
    

  • Chain 'C':
    Sequence; same for both SEQRES and ATOM records: (download)
    >5xopC (C:)
    maealfkeidvngdgavsyeevkafvskkraikneqllqlifksidkdgdgfidfeefak
    fygsia
    

  • Chain 'D':
    Sequence; same for both SEQRES and ATOM records: (download)
    >5xopD (D:)
    maealfkeidvngdgavsyeevkafvskkraikneqllqlifksidkdgdgfidfeefak
    fygsia
    

  • Chain 'E':
    Sequence; same for both SEQRES and ATOM records: (download)
    >5xopE (E:)
    maealfkeidvngdgavsyeevkafvskkraikneqllqlifksidkdgdgfidfeefak
    fygsia
    

  • Chain 'F':
    Sequence, based on SEQRES records: (download)
    >5xopF (F:)
    maealfkeidvngdgavsyeevkafvskkraikneqllqlifksidkdgdgfidfeefak
    fygsia
    

    Sequence, based on observed residues (ATOM records): (download)
    >5xopF (F:)
    maealfkeidvngdgavsyeevkafvskkraikneqllqlifksidkdgdgfidfeefak
    fygsi