PDB entry 5xmm
View 5xmm on RCSB PDB site
Description: fla-e*01801-167w/s
Class: immune system
Keywords: Domestic cats, MHC I, Feline immunodeficiency virus, CTL immunity, IMMUNE SYSTEM
Deposited on
2017-05-15, released
2017-12-13
The last revision prior to the SCOPe 2.06 freeze date was dated
2017-12-13, with a file datestamp of
2017-12-08.
Experiment type: XRAY
Resolution: 2.9 Å
R-factor: N/A
AEROSPACI score: 0.16
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: MHC class I antigen alpha chain
Species: Felis catus [TaxId:9685]
Gene: FLA-I
Database cross-references and differences (RAF-indexed):
- Uniprot C6ZK72 (0-274)
- engineered mutation (166)
Domains in SCOPe 2.06: d5xmma1, d5xmma2 - Chain 'B':
Compound: Beta-2-microglobulin
Species: Felis catus [TaxId:9685]
Gene: B2M
Database cross-references and differences (RAF-indexed):
- Uniprot Q5MGS7 (1-98)
- initiating methionine (0)
Domains in SCOPe 2.06: d5xmmb_ - Chain 'C':
Compound: gag polyprotein
Species: Feline immunodeficiency virus [TaxId:11674]
Gene: GAG
Database cross-references and differences (RAF-indexed):
- Heterogens: HOH
PDB Chain Sequences:
- Chain 'A':
Sequence; same for both SEQRES and ATOM records: (download)
>5xmmA (A:)
gshslryfytavsrpglgeprfiavgyvddtqfvrfdsdapnprmeprapwveqegpeyw
dretrkvkntaqifrvdlntllryynqsesgshniqrmygcdvepdgrllrgynqdsydg
kdyialnedlrswtaadtaaqitgrkweeageaerwrnylqgtcveslakyldmgketll
raespntrvtrhpisdrevtlrcwalgfypaeitltwqrdgqdhtqdaelvetrpagdgt
fqkwaavvvssgeeqrytchvqheglrepitlrwe
- Chain 'B':
Sequence; same for both SEQRES and ATOM records: (download)
>5xmmB (B:)
mvqhspkvqvysrhpaengkpnflncyvsgfhppqiditlmkngkkmeaeqtdlsfnrdw
tfyllvhteftptvedeyscqvnhttlsepkvvkwdrdm
- Chain 'C':
No sequence available.